RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 CTBP1Q13363 440 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 TTLL9Q3SXZ7 439 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 PHF19Q5T6S3 580 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 UNC5DQ6UXZ4 953 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 ZNF574Q6ZN55 896 aaPredicted RBP17.43■□□□□ 0.38
TSFM-208ENST00000543727 CYS1Q717R9 158 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 RAB11FIP2Q7L804 512 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 KDF1Q8NAX2 398 aaPredicted RBP17.43■□□□□ 0.38
TSFM-208ENST00000543727 OR5K2Q8NHB8 316 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 FBXO25Q8TCJ0 367 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 PYROXD1Q8WU10 500 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 NCSTNQ92542 709 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 CFAP36Q96G28 342 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 ZDHHC12Q96GR4 267 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 WDR83Q9BRX9 315 aaKnown RBP17.43■□□□□ 0.38
TSFM-208ENST00000543727 LRRC1Q9BTT6 524 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 TRIT1Q9H3H1 467 aaKnown RBP17.43■□□□□ 0.38
TSFM-208ENST00000543727 TFB2MQ9H5Q4 396 aaKnown RBP17.43■□□□□ 0.38
TSFM-208ENST00000543727 FAM114A2Q9NRY5 505 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 IARS2Q9NSE4 1012 aaKnown RBP17.43■□□□□ 0.38
TSFM-208ENST00000543727 ASF1AQ9Y294 204 aa17.43■□□□□ 0.38
TSFM-208ENST00000543727 EIF3FO00303 357 aaPredicted RBP17.42■□□□□ 0.38
TSFM-208ENST00000543727 PLD2O14939 933 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 CASC3O15234 703 aaKnown RBP17.42■□□□□ 0.38
TSFM-208ENST00000543727 ITGA2BP08514 1039 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 ERVK-10P10266 1014 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 CD9P21926 228 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 GABREP78334 506 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 CFHR1Q03591 330 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 GBX1Q14549 363 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 UGT3A1Q6NUS8 523 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 NEK10Q6ZWH5 1172 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 TMPRSS9Q7Z410 1059 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 OOSP2Q86WS3 158 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 MARCH9Q86YJ5 346 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 KRT222Q8N1A0 295 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 AGBL5Q8NDL9 886 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 LKAAEAR1Q8TD35 194 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 CCDC74BQ96LY2 380 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 ZNF578Q96N58 590 aaPredicted RBP17.42■□□□□ 0.38
TSFM-208ENST00000543727 PWWP2AQ96N64 755 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 FERD3LQ96RJ6 166 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 SEMA6CQ9H3T2 930 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 PLAC1Q9HBJ0 212 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 PPANQ9NQ55 473 aaKnown RBP17.42■□□□□ 0.38
TSFM-208ENST00000543727 MOCS1Q9NZB8 636 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 OGFRQ9NZT2 677 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 SATB2Q9UPW6 733 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 AK5Q9Y6K8 562 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 ADAMTS20P59510 1910 aa17.42■□□□□ 0.38
TSFM-208ENST00000543727 OR5K3A6NET4 321 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 IQCF5A8MTL0 148 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 C1QTNF9BB2RNN3 333 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 SPAG6O75602 509 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 CAPNS1P04632 268 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 C1QTNF9P0C862 333 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 HOXB3P14651 431 aaPredicted RBP17.41■□□□□ 0.38
TSFM-208ENST00000543727 CHRM3P20309 590 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 RBMS1P29558 406 aaKnown RBP17.41■□□□□ 0.38
TSFM-208ENST00000543727 SHMT2P34897 504 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 MGAT5Q09328 741 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 BRD3Q15059 726 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 C3orf38Q5JPI3 329 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 TEDDM1Q5T9Z0 273 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 LRRC8EQ6NSJ5 796 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 DUS1LQ6P1R4 473 aaKnown RBP17.41■□□□□ 0.38
TSFM-208ENST00000543727 PRSS42Q7Z5A4 293 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 ARHGAP22Q7Z5H3 698 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 SLC26A11Q86WA9 606 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 ANKMY2Q8IV38 441 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 FBXO39Q8N4B4 442 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 FOPNLQ96NB1 174 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 SAYSD1Q9NPB0 183 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 FBXO6Q9NRD1 293 aaPredicted RBP17.41■□□□□ 0.38
TSFM-208ENST00000543727 THSD1Q9NS62 852 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 ZFATQ9P243 1243 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 MTRF1LQ9UGC7 380 aaKnown RBP17.41■□□□□ 0.38
TSFM-208ENST00000543727 LOXL2Q9Y4K0 774 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 CHD8Q9HCK8 2581 aa17.41■□□□□ 0.38
TSFM-208ENST00000543727 ACACBO00763 2458 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 NIPSNAP2O75323 286 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 JMJD7P0C870 316 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 CBSLP0DN79 551 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 ENO3P13929 434 aaPredicted RBP17.4■□□□□ 0.38
TSFM-208ENST00000543727 TYRP1P17643 537 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 ITGB6P18564 788 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 CSTF2P33240 577 aaKnown RBP eCLIP17.4■□□□□ 0.38
TSFM-208ENST00000543727 CBSP35520 551 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 CCNFP41002 786 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 SKIV2L2P42285 1042 aaKnown RBP17.4■□□□□ 0.38
TSFM-208ENST00000543727 SLC7A5Q01650 507 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 GUCY2DQ02846 1103 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 PRKAA1Q13131 559 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 FASTKD3Q14CZ7 662 aaKnown RBP17.4■□□□□ 0.38
TSFM-208ENST00000543727 ZNF789Q5FWF6 425 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 HP1BP3Q5SSJ5 553 aaPredicted RBP17.4■□□□□ 0.38
TSFM-208ENST00000543727 ARMC6Q6NXE6 501 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 CYB5D1Q6P9G0 228 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 ZDHHC24Q6UX98 284 aa17.4■□□□□ 0.38
TSFM-208ENST00000543727 DCUN1D3Q8IWE4 304 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms