RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 RECQL5O94762 991 aaPredicted RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 GLUD1P00367 558 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 PRLP01236 227 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 PSMD7P51665 324 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 ISL1P61371 349 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 DSC1Q08554 894 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 CTU2Q2VPK5 515 aaKnown RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 TRIM16LQ309B1 348 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 FBXO48Q5FWF7 155 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 EGFLAMQ63HQ2 1017 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 FAM43BQ6ZT52 329 aaPredicted RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 PLPP6Q8IY26 295 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 PIANPQ8IYJ0 282 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 OR4F6Q8NGB9 312 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 UBTD2Q8WUN7 234 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 FIG4Q92562 907 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 ADAM2Q99965 735 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 CFHR5Q9BXR6 569 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 ADGRE3Q9BY15 652 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 P2RY12Q9H244 342 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 TRIT1Q9H3H1 467 aaKnown RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 CARS2Q9HA77 564 aaKnown RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 DCAF13Q9NV06 445 aaKnown RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 WARS2Q9UGM6 360 aaKnown RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 LIMD1Q9UGP4 676 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 GABRQQ9UN88 632 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 ASB1Q9Y576 335 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 PCDHGA4Q9Y5G9 962 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 TRBV5-3A0A0A0MS03 114 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 LOC100130705A0A1B0GUX0 176 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 ZNF99A8MXY4 864 aaPredicted RBP13.48□□□□□ -0.25
VPS33A-208ENST00000543633 DFNA5O60443 496 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 NDUFS2O75306 463 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 HTR1BP28222 390 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 OPRL1P41146 370 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 GPR15P49685 360 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 CCR3P51677 355 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 CLCN7P51798 805 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 MLLT10P55197 1068 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 CDH4P55283 916 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 FCGRTP55899 365 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 AQP6Q13520 282 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 SPCS2Q15005 226 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 NKG7Q16617 165 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 MAPKAPK3Q16644 382 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 RUNDC3AQ59EK9 446 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 VARS2Q5ST30 1063 aaKnown RBP13.48□□□□□ -0.25
VPS33A-208ENST00000543633 SBSNQ6UWP8 590 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 ENPP6Q6UWR7 440 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 CERS6Q6ZMG9 384 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 CALHM3Q86XJ0 350 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 MIB1Q86YT6 1006 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 TMCO5AQ8N6Q1 288 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 FAM162AQ96A26 154 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 SPATA17Q96L03 361 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 CDK5RAP1Q96SZ6 601 aaKnown RBP13.48□□□□□ -0.25
VPS33A-208ENST00000543633 C19orf43Q9BQ61 176 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 PSD2Q9BQI7 771 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 CLMPQ9H6B4 373 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 SMURF2Q9HAU4 748 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 SCUBE2Q9NQ36 999 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.48□□□□□ -0.25
VPS33A-208ENST00000543633 FKBPLQ9UIM3 349 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 CPQQ9Y646 472 aa13.48□□□□□ -0.25
VPS33A-208ENST00000543633 OR6C75A6NL08 312 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 GNGT2O14610 69 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 STX7O15400 261 aaKnown RBP13.47□□□□□ -0.25
VPS33A-208ENST00000543633 ERN1O75460 977 aaKnown RBP13.47□□□□□ -0.25
VPS33A-208ENST00000543633 NTRK1P04629 796 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 ALDH2P05091 517 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 ZDHHC11BP0C7U3 371 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 PCNAP12004 261 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 JUNDP17535 347 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 GRK3P35626 688 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 PIGAP37287 484 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 DCTP40126 519 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 SERPINB10P48595 397 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 DGKQP52824 942 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 GP2P55259 537 aaKnown RBP13.47□□□□□ -0.25
VPS33A-208ENST00000543633 OXCT1P55809 520 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 CXCR4P61073 352 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 CTF1Q16619 201 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 MEP1AQ16819 746 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 IMPG1Q17R60 797 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 DPY19L1Q2PZI1 675 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 CACHD1Q5VU97 1274 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 SDHAF4Q5VUM1 108 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 LAIR2Q6ISS4 152 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 SPESP1Q6UW49 350 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 NCCRP1Q6ZVX7 275 aaPredicted RBP13.47□□□□□ -0.25
VPS33A-208ENST00000543633 FAM9CQ8IZT9 166 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 LGI2Q8N0V4 545 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 FAM86B1Q8N7N1 296 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 FBXO30Q8TB52 745 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 RHBDF1Q96CC6 855 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 REXO5Q96IC2 774 aaKnown RBP13.47□□□□□ -0.25
VPS33A-208ENST00000543633 DPY30Q9C005 99 aa13.47□□□□□ -0.25
VPS33A-208ENST00000543633 ANKHQ9HCJ1 492 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms