RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PRAMEF33A0A0G2JMD5 474 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 A6NCN8 305 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 TM4SF5O14894 197 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 DUX1O43812 170 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 ERLIN1O75477 346 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 GPC4O75487 556 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 KRT38O76015 456 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 UBXN7O94888 489 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 SYF2O95926 243 aaKnown RBP6.16□□□□□ -1.42
LTBR-212ENST00000543542 CATP04040 527 aaKnown RBP6.16□□□□□ -1.42
LTBR-212ENST00000543542 PROS1P07225 676 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 CBSLP0DN79 551 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 ENO3P13929 434 aaPredicted RBP6.16□□□□□ -1.42
LTBR-212ENST00000543542 PNLIPP16233 465 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 STMN1P16949 149 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 TYRP1P17643 537 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 GABRB3P28472 473 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 CBSP35520 551 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 GPR3P46089 330 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 FASLGP48023 281 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 SERPINB9P50453 376 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 CLCN7P51798 805 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 CDKN2DP55273 166 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 IL2P60568 153 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 UBE2IP63279 158 aaKnown RBP6.16□□□□□ -1.42
LTBR-212ENST00000543542 CCL7P80098 99 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 POU4F1Q01851 419 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 IFFO1Q0D2I5 559 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 FOXC1Q12948 553 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 PRKAA1Q13131 559 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 BMPR2Q13873 1038 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 GPR18Q14330 331 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 SLC29A2Q14542 456 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 ACSBG2Q5FVE4 666 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 SNAP47Q5SQN1 464 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 LGSNQ5TDP6 509 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 MROH9Q5TGP6 573 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 NKAIN2Q5VXU1 208 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 CAPRIN2Q6IMN6 1127 aaKnown RBP6.16□□□□□ -1.42
LTBR-212ENST00000543542 LRRC8EQ6NSJ5 796 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 WDR93Q6P2C0 686 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 EMBQ6PCB8 327 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 KLHL35Q6PF15 583 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 PAQR3Q6TCH7 311 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 UNC5DQ6UXZ4 953 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 TMEM26Q6ZUK4 368 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 SPRED1Q7Z699 444 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 SLCO6A1Q86UG4 719 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 PIM3Q86V86 326 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 ZC3HC1Q86WB0 502 aaKnown RBP6.16□□□□□ -1.42
LTBR-212ENST00000543542 OOSP2Q86WS3 158 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 VRK3Q8IV63 474 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 TBC1D21Q8IYX1 336 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 SLC22A15Q8IZD6 547 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 NKAPQ8N5F7 415 aaKnown RBP6.16□□□□□ -1.42
LTBR-212ENST00000543542 ACVR1CQ8NER5 493 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 OR5AR1Q8NGP9 310 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 WDR48Q8TAF3 677 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 CD200R1Q8TD46 325 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 LCN9Q8WX39 176 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 NCSTNQ92542 709 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 LINGO1Q96FE5 620 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 PAFAH2Q99487 392 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 TBC1D10AQ9BXI6 508 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 LRRN3Q9H3W5 708 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 SRMSQ9H3Y6 488 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 MVB12BQ9H7P6 319 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 CAB39LQ9H9S4 337 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 SYTL2Q9HCH5 934 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 GPAMQ9HCL2 828 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 SLC40A1Q9NP59 571 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 GALPQ9UBC7 116 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 KLHL3Q9UH77 587 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 POLG2Q9UHN1 485 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 ATXN7L1Q9ULK2 861 aaPredicted RBP6.16□□□□□ -1.42
LTBR-212ENST00000543542 MTO1Q9Y2Z2 717 aaKnown RBP6.16□□□□□ -1.42
LTBR-212ENST00000543542 PCDHGA1Q9Y5H4 931 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 ZNF292O60281 2723 aa6.16□□□□□ -1.42
LTBR-212ENST00000543542 ASCC3Q8N3C0 2202 aaKnown RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 ARHGEF17Q96PE2 2063 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 IGHV1OR21-1A0A087WYE8 117 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 LY6G6EA0A0G2JKS1 128 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 TLDC2A0PJX2 215 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 GSAPA4D1B5 854 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 OR6C74A6NCV1 312 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 PRR19A6NJB7 356 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 SMIM23A6NLE4 172 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 AGRPO00253 132 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 ZBTB14O43829 449 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 OPA1O60313 960 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 RASSF9O75901 435 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 KRT37O76014 449 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 SLCO2B1O94956 709 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 ITGA2BP08514 1039 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 ABHD2P08910 425 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 HIST1H2AGP0C0S8 130 aaPredicted RBP6.15□□□□□ -1.42
LTBR-212ENST00000543542 MPC1LP0DKB6 136 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 JUPP14923 745 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 HIST1H2ADP20671 130 aa6.15□□□□□ -1.42
LTBR-212ENST00000543542 CYP2A7P20853 494 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms