RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	KIRREL3	Q8IZU9	778 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	AGGF1	Q8N302	714 aa	eCLIP	6.33	□□□□□ -1.4
CIT-213	ENST00000543324	PLD5	Q8N7P1	536 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	OR6C4	Q8NGE1	309 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	ATL2	Q8NHH9	583 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	PTCD2	Q8WV60	388 aa	Known RBP	6.33	□□□□□ -1.4
CIT-213	ENST00000543324	CCDC74A	Q96AQ1	378 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	KLHL29	Q96CT2	875 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	NUS1	Q96E22	293 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	COX14	Q96I36	57 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	RUNDC3B	Q96NL0	473 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	TMEM74	Q96NL1	305 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	OLFM3	Q96PB7	478 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	TRIB3	Q96RU7	358 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	ELAC2	Q9BQ52	826 aa	Known RBP	6.33	□□□□□ -1.4
CIT-213	ENST00000543324	ERP44	Q9BS26	406 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	TDRD1	Q9BXT4	1180 aa	Known RBP	6.33	□□□□□ -1.4
CIT-213	ENST00000543324	YIPF3	Q9GZM5	350 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	TMEM168	Q9H0V1	697 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	CARD9	Q9H257	536 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	LRMDA	Q9H2I8	198 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	WDR26	Q9H7D7	661 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	SYNDIG1	Q9H7V2	258 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	RNPEPL1	Q9HAU8	725 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	PAPOLB	Q9NRJ5	636 aa	Known RBP	6.33	□□□□□ -1.4
CIT-213	ENST00000543324	TXLNG	Q9NUQ3	528 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	KCTD5	Q9NXV2	234 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	6.33	□□□□□ -1.4
CIT-213	ENST00000543324	PCDHGC4	Q9Y5F7	938 aa		6.33	□□□□□ -1.4
CIT-213	ENST00000543324	OAS3	Q9Y6K5	1087 aa	Known RBP	6.33	□□□□□ -1.4
CIT-213	ENST00000543324	PIKFYVE	Q9Y2I7	2098 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	DPPA5	A6NC42	116 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	TTC36	A6NLP5	189 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	FAM171A2	A8MVW0	826 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	TTI1	O43156	1089 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	NUDT21	O43809	227 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	HNRNPCL1	O60812	293 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	PEX11A	O75192	247 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	UNC5C	O95185	931 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	LY6G6D	O95868	133 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	HLA-DQB2	P05538	268 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	TMEM253	P0C7T8	217 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	GLB1	P16278	677 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	ZNF30	P17039	623 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	XPA	P23025	273 aa	Predicted RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	KEL	P23276	732 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	CCNC	P24863	283 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	PEX19	P40855	299 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	ETV3	P41162	512 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	STC1	P52823	247 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	HADHB	P55084	474 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	SH3BGR	P55822	239 aa	Predicted RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	ITGA1	P56199	1179 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	RPL26	P61254	145 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	IFI35	P80217	286 aa	Predicted RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	B4GALNT1	Q00973	533 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	PTS	Q03393	145 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	GBE1	Q04446	702 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	KLC1	Q07866	573 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	PPID	Q08752	370 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	NIPAL4	Q0D2K0	466 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	SQSTM1	Q13501	440 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	PDK2	Q15119	407 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	SLC14A2	Q15849	920 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	TSNAXIP1	Q2TAA8	658 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	HENMT1	Q5T8I9	393 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	ARMC12	Q5T9G4	340 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	MARC1	Q5VT66	337 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	SLC9A4	Q6AI14	798 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	ENPP7	Q6UWV6	458 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	ZDHHC24	Q6UX98	284 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	ADAMTSL4	Q6UY14	1074 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	RFLNA	Q6ZTI6	216 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324		Q6ZVL8	140 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	SPRED1	Q7Z699	444 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	NT5DC3	Q86UY8	548 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	GKN2	Q86XP6	184 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	CNTD1	Q8N815	330 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	CCL4L1	Q8NHW4	92 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	FBF1	Q8TES7	1133 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	CKAP2	Q8WWK9	683 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	STARD8	Q92502	1023 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	GLMN	Q92990	594 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	SERPINB12	Q96P63	405 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	SMIM14	Q96QK8	99 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	SELENOS	Q9BQE4	189 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	POLR1E	Q9GZS1	481 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	FAM192A	Q9GZU8	254 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	DDX47	Q9H0S4	455 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	VCX	Q9H320	206 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	GPN2	Q9H9Y4	310 aa	Predicted RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	MRPL40	Q9NQ50	206 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	SEMA3G	Q9NS98	782 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	TRNAU1AP	Q9NX07	287 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	DTL	Q9NZJ0	730 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	MTRF1L	Q9UGC7	380 aa	Known RBP	6.32	□□□□□ -1.4
CIT-213	ENST00000543324	PCYOX1	Q9UHG3	505 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	GPR34	Q9UPC5	381 aa		6.32	□□□□□ -1.4
CIT-213	ENST00000543324	WNK1	Q9H4A3	2382 aa		6.32	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms