RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 ASPMQ8IZT6 3477 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 DXOO77932 396 aaKnown RBP17.92■□□□□ 0.46
COPS7A-216ENST00000543170 C9P02748 559 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 HOXB3P14651 431 aaPredicted RBP17.92■□□□□ 0.46
COPS7A-216ENST00000543170 LSSP48449 732 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 MPP1Q00013 466 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 SLC7A5Q01650 507 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 HSPA14Q0VDF9 509 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 GBX1Q14549 363 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 BRD3Q15059 726 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 PLCL1Q15111 1095 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 HP1BP3Q5SSJ5 553 aaPredicted RBP17.92■□□□□ 0.46
COPS7A-216ENST00000543170 ANKMY2Q8IV38 441 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 TBC1D21Q8IYX1 336 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 PYROXD1Q8WU10 500 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 CCDC74BQ96LY2 380 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 POLR1BQ9H9Y6 1135 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 SAYSD1Q9NPB0 183 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 FAM114A2Q9NRY5 505 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 MOCS1Q9NZB8 636 aa17.92■□□□□ 0.46
COPS7A-216ENST00000543170 ESYT3A0FGR9 886 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 C1QTNF9BB2RNN3 333 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 E5RI56 91 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 NIPSNAP2O75323 286 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 CAPNS1P04632 268 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 GSTA2P09210 222 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 ANKRD34CP0C6C1 535 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 C1QTNF9P0C862 333 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 AMD1P17707 334 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 MAPK9P45984 424 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 GUCY2DQ02846 1103 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 KRT33BQ14525 404 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 TRADDQ15628 312 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 PHF19Q5T6S3 580 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 TEDDM1Q5T9Z0 273 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 TRMT10BQ6PF06 316 aaKnown RBP17.91■□□□□ 0.46
COPS7A-216ENST00000543170 UNC5DQ6UXZ4 953 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 NAPRTQ6XQN6 538 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 LSMEM2Q8N112 164 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 OR5K2Q8NHB8 316 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 NCSTNQ92542 709 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 RSC1A1Q92681 617 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 FERD3LQ96RJ6 166 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 CMKLR1Q99788 373 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 TFB2MQ9H5Q4 396 aaKnown RBP17.91■□□□□ 0.46
COPS7A-216ENST00000543170 ZDHHC18Q9NUE0 388 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 AKAP7Q9P0M2 348 aaPredicted RBP17.91■□□□□ 0.46
COPS7A-216ENST00000543170 TMEM9Q9P0T7 183 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 POLG2Q9UHN1 485 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 CORO1CQ9ULV4 474 aaPredicted RBP17.91■□□□□ 0.46
COPS7A-216ENST00000543170 SATB2Q9UPW6 733 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 ASF1AQ9Y294 204 aa17.91■□□□□ 0.46
COPS7A-216ENST00000543170 A0A1W2PNU3 283 aaPredicted RBP17.9■□□□□ 0.46
COPS7A-216ENST00000543170 TOX3O15405 576 aaPredicted RBP17.9■□□□□ 0.46
COPS7A-216ENST00000543170 HAUS5O94927 633 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 RPN2P04844 631 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 TYRP1P17643 537 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 CHRM3P20309 590 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 PPM1FP49593 454 aaPredicted RBP17.9■□□□□ 0.46
COPS7A-216ENST00000543170 CLCN7P51798 805 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 GABREP78334 506 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 MGAT5Q09328 741 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 C3orf38Q5JPI3 329 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 ZNF549Q6P9A3 640 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 CYS1Q717R9 158 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 RAB11FIP2Q7L804 512 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 OOSP2Q86WS3 158 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 VRK3Q8IV63 474 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 AARSD1Q9BTE6 412 aaKnown RBP17.9■□□□□ 0.46
COPS7A-216ENST00000543170 TRIT1Q9H3H1 467 aaKnown RBP17.9■□□□□ 0.46
COPS7A-216ENST00000543170 CCDC86Q9H6F5 360 aaKnown RBP17.9■□□□□ 0.46
COPS7A-216ENST00000543170 L2HGDHQ9H9P8 463 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 PPANQ9NQ55 473 aaKnown RBP17.9■□□□□ 0.46
COPS7A-216ENST00000543170 NSMCE4AQ9NXX6 385 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 ZFATQ9P243 1243 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 MED16Q9Y2X0 877 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 LOXL2Q9Y4K0 774 aa17.9■□□□□ 0.46
COPS7A-216ENST00000543170 OR5K3A6NET4 321 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 MATN2O00339 956 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 PLD2O14939 933 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 ZNF500O60304 480 aaPredicted RBP17.89■□□□□ 0.45
COPS7A-216ENST00000543170 KDM1AO60341 852 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 MPOP05164 745 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 CD9P21926 228 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 CARSP49589 748 aaKnown RBP17.89■□□□□ 0.45
COPS7A-216ENST00000543170 CSE1LP55060 971 aaKnown RBP17.89■□□□□ 0.45
COPS7A-216ENST00000543170 ILF2Q12905 390 aaKnown RBP17.89■□□□□ 0.45
COPS7A-216ENST00000543170 C16orf72Q14CZ0 275 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 TTLL9Q3SXZ7 439 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 CNSTQ6PJW8 725 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 CEP128Q6ZU80 1094 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 PRSS42Q7Z5A4 293 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 ARHGAP22Q7Z5H3 698 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 SLC26A11Q86WA9 606 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 ZBTB2Q8N680 514 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 KDF1Q8NAX2 398 aaPredicted RBP17.89■□□□□ 0.45
COPS7A-216ENST00000543170 OR52E1Q8NGJ3 308 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 OR5AR1Q8NGP9 310 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 ZDHHC12Q96GR4 267 aa17.89■□□□□ 0.45
COPS7A-216ENST00000543170 PRR11Q96HE9 360 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms