RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 UGT8Q16880 541 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 SKIDA1Q1XH10 827 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 KCTD11Q693B1 232 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 HOOK3Q86VS8 718 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 APLFQ8IW19 511 aaPredicted RBP12.76□□□□□ -0.37
RTN3-212ENST00000543123 TEX19Q8NA77 164 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 UBE2Q2Q8WVN8 375 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 MR1Q95460 341 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 ZNF501Q96CX3 271 aaPredicted RBP12.76□□□□□ -0.37
RTN3-212ENST00000543123 RNF31Q96EP0 1072 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 LRFN5Q96NI6 719 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 TTC1Q99614 292 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 FRMD8P1Q9BZ68 369 aaPredicted RBP12.76□□□□□ -0.37
RTN3-212ENST00000543123 TFB2MQ9H5Q4 396 aaKnown RBP12.76□□□□□ -0.37
RTN3-212ENST00000543123 TP53TG5Q9Y2B4 290 aa12.76□□□□□ -0.37
RTN3-212ENST00000543123 C2orf74A8MZ97 194 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 GOLGA6L6A8MZA4 724 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 CCL22O00626 93 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 LIN7AO14910 233 aaPredicted RBP12.75□□□□□ -0.37
RTN3-212ENST00000543123 CYP2A7P20853 494 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 PREPP48147 710 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 ARCN1P48444 511 aaKnown RBP12.75□□□□□ -0.37
RTN3-212ENST00000543123 PLOD1Q02809 727 aaPredicted RBP12.75□□□□□ -0.37
RTN3-212ENST00000543123 KLF1Q13351 362 aaPredicted RBP12.75□□□□□ -0.37
RTN3-212ENST00000543123 ITIH4Q14624 930 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 SYTL3Q4VX76 610 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 LYPLAL1Q5VWZ2 237 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 IZUMO3Q5VZ72 239 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 AADACL2Q6P093 401 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 AMIGO1Q86WK6 493 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 LILRA3Q8N6C8 439 aaPredicted RBP12.75□□□□□ -0.37
RTN3-212ENST00000543123 NAT14Q8WUY8 206 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 COL12A1Q99715 3063 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 TLR10Q9BXR5 811 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 SLC7A5P2Q9GIP4 190 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 OR52A5Q9H2C5 316 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 SMARCAL1Q9NZC9 954 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 IMPACTQ9P2X3 320 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 SERTAD3Q9UJW9 196 aa12.75□□□□□ -0.37
RTN3-212ENST00000543123 G3BP2Q9UN86 482 aaKnown RBP12.75□□□□□ -0.37
RTN3-212ENST00000543123 SPENQ96T58 3664 aaKnown RBP12.75□□□□□ -0.37
RTN3-212ENST00000543123 SLC9B1P1A6NJY1 282 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 METTL18O95568 372 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 FTCDO95954 541 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 HBQ1P09105 142 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 FURINP09958 794 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 RAB40ALP0C0E4 278 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 MSNP26038 577 aaKnown RBP12.74□□□□□ -0.37
RTN3-212ENST00000543123 PRDX3P30048 256 aaKnown RBP12.74□□□□□ -0.37
RTN3-212ENST00000543123 STIP1P31948 543 aaKnown RBP12.74□□□□□ -0.37
RTN3-212ENST00000543123 SHMT2P34897 504 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 LMAN1P49257 510 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 FOXK1P85037 733 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 CDH17Q12864 832 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 SEMA5AQ13591 1074 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 BOP1Q14137 746 aaKnown RBP12.74□□□□□ -0.37
RTN3-212ENST00000543123 SEL1L2Q5TEA6 688 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 PACS1Q6VY07 963 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 CERS6Q6ZMG9 384 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 ASB18Q6ZVZ8 466 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 RNF10Q8N5U6 811 aaKnown RBP12.74□□□□□ -0.37
RTN3-212ENST00000543123 CLDN19Q8N6F1 224 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 DNAAF3Q8N9W5 541 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 OR52E1Q8NGJ3 308 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 SLC35B2Q8TB61 432 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 TFGQ92734 400 aaPredicted RBP12.74□□□□□ -0.37
RTN3-212ENST00000543123 N4BP2L2Q92802 583 aaPredicted RBP12.74□□□□□ -0.37
RTN3-212ENST00000543123 CLIP3Q96DZ5 547 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 CDKN2AIPNLQ96HQ2 116 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 C17orf62Q9BQA9 187 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 DPH2Q9BQC3 489 aaPredicted RBP12.74□□□□□ -0.37
RTN3-212ENST00000543123 TMEM121Q9BTD3 319 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 HGH1Q9BTY7 390 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 TSSK1BQ9BXA7 367 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 PITPNM3Q9BZ71 974 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 RBSNQ9H1K0 784 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 ACTR5Q9H9F9 607 aaPredicted RBP12.74□□□□□ -0.37
RTN3-212ENST00000543123 POLG2Q9UHN1 485 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 FARSAQ9Y285 508 aaKnown RBP12.74□□□□□ -0.37
RTN3-212ENST00000543123 PTPN13Q12923 2485 aa12.74□□□□□ -0.37
RTN3-212ENST00000543123 MAST4O15021 2626 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 HEATR9A2RTY3 570 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 MROH6A6NGR9 719 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 TMEM150CB9EJG8 249 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 C9J4A7 227 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 E7EVH7 732 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 MEN1O00255 615 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 BTN3A1O00481 513 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 OR56A5P0C7T3 313 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 TPH1P17752 444 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 PPARGP37231 505 aaPredicted RBP12.73□□□□□ -0.37
RTN3-212ENST00000543123 PGDP52209 483 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 ITGA1P56199 1179 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 GPS2Q13227 327 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 DBN1Q16643 649 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 ZNF658BQ4V348 819 aaPredicted RBP12.73□□□□□ -0.37
RTN3-212ENST00000543123 FAM199XQ6PEV8 388 aaPredicted RBP12.73□□□□□ -0.37
RTN3-212ENST00000543123 AFTPHQ6ULP2 937 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 PPP1R21Q6ZMI0 780 aa12.73□□□□□ -0.37
RTN3-212ENST00000543123 ZNF517Q6ZMY9 492 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms