RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 RPLP0P05388 317 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 GP5P40197 560 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 SKIV2L2P42285 1042 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 CDKN2DP55273 166 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 GPLD1P80108 840 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 GPR18Q14330 331 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 KRT33BQ14525 404 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 FAM45BPQ6NSW5 357 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 TRMT10CQ7L0Y3 403 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 GPATCH11Q8N954 259 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 PHC3Q8NDX5 983 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 FAM45AQ8TCE6 357 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 CD200R1Q8TD46 325 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 ATXN7L3BQ96GX2 97 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 FERD3LQ96RJ6 166 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 CYTH2Q99418 400 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 TBC1D10AQ9BXI6 508 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 ACSS3Q9H6R3 686 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 KIR3DX1Q9H7L2 352 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 ASF1AQ9Y294 204 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 VWA7Q9Y334 891 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 V9GYY5 206 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 SPTBN2O15020 2390 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 FAM95CA0A1B0GW59 222 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 CASC3O15234 703 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 FDXRP22570 491 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 CD1CP29017 333 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 PMS2P54278 862 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 ABRQ12979 859 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 SQSTM1Q13501 440 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 EFTUD2Q15029 972 aaKnown RBP eCLIP16.68■□□□□ 0.264e-7■■■■□ 25.4
RABGGTA-203ENST00000543002 CLPPQ16740 277 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 ERCC6LQ2NKX8 1250 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 ACSBG2Q5FVE4 666 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 GRTP1Q5TC63 336 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 CDCP2Q5VXM1 449 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 TBC1D21Q8IYX1 336 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 CHCHD4Q8N4Q1 142 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 OR10G6Q8NH81 332 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 VPS39Q96JC1 886 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 GFM1Q96RP9 751 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 RBBP8Q99708 897 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 EPB41L1Q9H4G0 881 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 SLC24A2Q9UI40 661 aa16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 TRMT6Q9UJA5 497 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-203ENST00000543002 EIF3FO00303 357 aaPredicted RBP16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 TCEA3O75764 348 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 MT-CO3P00414 261 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 CBSLP0DN79 551 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 ENO3P13929 434 aaPredicted RBP16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 CBSP35520 551 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 VSNL1P62760 191 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 SPIDRQ14159 915 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 AMZ1Q400G9 498 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 HES3Q5TGS1 186 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 WDR93Q6P2C0 686 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 UNC5DQ6UXZ4 953 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 NEK10Q6ZWH5 1172 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 ERMP1Q7Z2K6 904 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 PIM3Q86V86 326 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 TMPRSS12Q86WS5 348 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 CACTIN-AS1Q8N1I8 211 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 GALNT15Q8N3T1 639 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 ACVR1CQ8NER5 493 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 OR5AR1Q8NGP9 310 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 OR5K2Q8NHB8 316 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 AHCYL2Q96HN2 611 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 ELMO2Q96JJ3 720 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 OLFM1Q99784 485 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 TRIT1Q9H3H1 467 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 SYNDIG1Q9H7V2 258 aa16.67■□□□□ 0.26
RABGGTA-203ENST00000543002 A0A087WUV0 522 aaPredicted RBP16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 D6RAR5 112 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 RIPK2O43353 540 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 DUX1O43812 170 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 UBXN7O94888 489 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 MATN4O95460 622 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 CPNE6O95741 557 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 RPN2P04844 631 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 ADRB1P08588 477 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 ABHD2P08910 425 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 MCM3P25205 808 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 SPRP35270 261 aaPredicted RBP16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 LIMK2P53671 638 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 CLDN6P56747 220 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 FOXC1Q12948 553 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 PDAP1Q13442 181 aaKnown RBP16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 KLHL38Q2WGJ6 581 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 NKAIN2Q5VXU1 208 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 PAQR3Q6TCH7 311 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 RBM44Q6ZP01 1051 aaKnown RBP16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 USP53Q70EK8 1073 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 TMPRSS7Q7RTY8 843 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 SPNS2Q8IVW8 549 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 CPNE9Q8IYJ1 553 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 CFAP61Q8NHU2 1237 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 SKA2Q8WVK7 121 aaPredicted RBP16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 FOPNLQ96NB1 174 aa16.66■□□□□ 0.26
RABGGTA-203ENST00000543002 GPR22Q99680 433 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms