RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 DERL2Q9GZP9 239 aa22.58■■□□□ 1.21
HOMER3-205ENST00000542541 PARD6AQ9NPB6 346 aa22.58■■□□□ 1.21
HOMER3-205ENST00000542541 B4DGG1 531 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 ATP8B1O43520 1251 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 TSPAN12O95859 305 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 RPN2P04844 631 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 LTA4HP09960 611 aaKnown RBP22.57■■□□□ 1.2
HOMER3-205ENST00000542541 BRAFP15056 766 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 TGM1P22735 817 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 ACADLP28330 430 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 ABRQ12979 859 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 CSHL1Q14406 222 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 CLCA4Q14CN2 919 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 FAM83EQ2M2I3 478 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 OGFOD3Q6PK18 319 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 CYHR1Q6ZMK1 362 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 TRABD2AQ86V40 505 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 LCA5Q86VQ0 697 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 ANKRD49Q8WVL7 239 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 C12orf66Q96MD2 445 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 INSM2Q96T92 566 aaPredicted RBP22.57■■□□□ 1.2
HOMER3-205ENST00000542541 NMRAL1Q9HBL8 299 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 ZNF446Q9NWS9 450 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 AGPSO00116 658 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 CDX4O14627 284 aaPredicted RBP22.57■■□□□ 1.2
HOMER3-205ENST00000542541 MATN4O95460 622 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 EML2O95834 649 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 PYGBP11216 843 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 RPE65Q16518 533 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 C6orf132Q5T0Z8 1188 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 KLC3Q6P597 504 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 UNC5DQ6UXZ4 953 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 PIWIL4Q7Z3Z4 852 aaKnown RBP22.57■■□□□ 1.2
HOMER3-205ENST00000542541 NAGSQ8N159 534 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 OR4C6Q8NH72 309 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 CXorf40BQ96DE9 158 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 RMDN2Q96LZ7 410 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 TMBIM4Q9HC24 238 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 ASF1AQ9Y294 204 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 COLEC10Q9Y6Z7 277 aa22.57■■□□□ 1.2
HOMER3-205ENST00000542541 TDRD6O60522 2096 aaKnown RBP22.56■■□□□ 1.2
HOMER3-205ENST00000542541 GOLGA8RI6L899 631 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 KLHL2O95198 593 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 XRCC1P18887 633 aaPredicted RBP22.56■■□□□ 1.2
HOMER3-205ENST00000542541 KRT4P19013 534 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 NDUFS1P28331 727 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 KRT33BQ14525 404 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 ZCCHC8Q6NZY4 707 aaKnown RBP22.56■■□□□ 1.2
HOMER3-205ENST00000542541 TTC23LQ6PF05 361 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 ASCL5Q7RTU5 278 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 SRRM1Q8IYB3 904 aaKnown RBP22.56■■□□□ 1.2
HOMER3-205ENST00000542541 SFRP1Q8N474 314 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 CFAP61Q8NHU2 1237 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 IMP3Q9NV31 184 aaKnown RBP22.56■■□□□ 1.2
HOMER3-205ENST00000542541 PCMTD2Q9NV79 361 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 SCHIP1Q9P0W5 487 aaPredicted RBP22.56■■□□□ 1.2
HOMER3-205ENST00000542541 TSR3Q9UJK0 312 aaKnown RBP22.56■■□□□ 1.2
HOMER3-205ENST00000542541 CABIN1Q9Y6J0 2220 aa22.56■■□□□ 1.2
HOMER3-205ENST00000542541 TMEM131Q92545 1883 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 ZBTB14O43829 449 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 SASH3O75995 380 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 C8GP07360 202 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 GIMD1P0DJR0 217 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 MTHFD1P11586 935 aaKnown RBP22.55■■□□□ 1.2
HOMER3-205ENST00000542541 CCT5P48643 541 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 KPNA2P52292 529 aaKnown RBP22.55■■□□□ 1.2
HOMER3-205ENST00000542541 TSNAXIP1Q2TAA8 658 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 DBX2Q6ZNG2 339 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 SLC9B2Q86UD5 537 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 TRIM48Q8IWZ4 208 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 MAPK15Q8TD08 544 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 MAGEC3Q8TD91 643 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 KCTD4Q8WVF5 259 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 ASB11Q8WXH4 323 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 ZBTB9Q96C00 473 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 SMC6Q96SB8 1091 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 STN1Q9H668 368 aaKnown RBP22.55■■□□□ 1.2
HOMER3-205ENST00000542541 MVB12BQ9H7P6 319 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 NCKIPSDQ9NZQ3 722 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 DCDC2Q9UHG0 476 aa22.55■■□□□ 1.2
HOMER3-205ENST00000542541 RUVBL2Q9Y230 463 aaKnown RBP22.55■■□□□ 1.2
HOMER3-205ENST00000542541 ADAMTS9Q9P2N4 1935 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 TRBV23OR9-2A0A075B6M9 112 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 CCDC189A1A4V9 331 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 OR52A4PA6NMU1 304 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 SLC16A5O15375 505 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 FLRT2O43155 660 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 CATP04040 527 aaKnown RBP22.54■■□□□ 1.2
HOMER3-205ENST00000542541 CD1DP15813 335 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 CCNFP41002 786 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 GRK6P43250 576 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 IRF9Q00978 393 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 SP140Q13342 867 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 BIRC2Q13490 618 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 TNFAIP8L3Q5GJ75 292 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 SPNS2Q8IVW8 549 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 TBC1D21Q8IYX1 336 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 CENPLQ8N0S6 344 aaPredicted RBP22.54■■□□□ 1.2
HOMER3-205ENST00000542541 SPATA6LQ8N4H0 392 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 ARL10Q8N8L6 244 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms