RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 MSNP26038 577 aaKnown RBP15.19■□□□□ 0.02
VPS33A-206ENST00000542310 FDFT1P37268 417 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 CASRP41180 1078 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 CDKN1CP49918 316 aaPredicted RBP15.19■□□□□ 0.02
VPS33A-206ENST00000542310 PMS2P54278 862 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 GSDMDP57764 484 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 CDH17Q12864 832 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 BOP1Q14137 746 aaKnown RBP15.19■□□□□ 0.02
VPS33A-206ENST00000542310 OASLQ15646 514 aaKnown RBP15.19■□□□□ 0.02
VPS33A-206ENST00000542310 SKIDA1Q1XH10 827 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 CERS6Q6ZMG9 384 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 ZNF517Q6ZMY9 492 aaPredicted RBP15.19■□□□□ 0.02
VPS33A-206ENST00000542310 TAS2R42Q7RTR8 314 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 SYVN1Q86TM6 617 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 GAS2L3Q86XJ1 694 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 TMEM126BQ8IUX1 230 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 PIANPQ8IYJ0 282 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 OR4E2Q8NGC2 313 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 PEX13Q92968 403 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.19■□□□□ 0.02
VPS33A-206ENST00000542310 ABHD17AQ96GS6 310 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 ACTL8Q9H568 366 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 KCND1Q9NSA2 647 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 SPENQ96T58 3664 aaKnown RBP15.19■□□□□ 0.02
VPS33A-206ENST00000542310 SETXQ7Z333 2677 aaKnown RBP15.18■□□□□ 0.02
VPS33A-206ENST00000542310 A0A0U1RQJ8 604 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 TCRBV7S2A1N4TA0A589 114 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 HEATR9A2RTY3 570 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 F8W8V4 182 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 MKRN2OSH3BPM6 223 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 PYCARD-AS1I3L0S3 204 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 BTN3A1O00481 513 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 LIASO43766 372 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 RFPL1O75677 317 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 SPTBP11277 2137 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 TPH1P17752 444 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 PTPN4P29074 926 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 FOXN2P32314 431 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 PLOD1Q02809 727 aaPredicted RBP15.18■□□□□ 0.02
VPS33A-206ENST00000542310 TLE1Q04724 770 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 ERV3-1Q14264 604 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 GPR19Q15760 415 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 UGT8Q16880 541 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 LYPLAL1Q5VWZ2 237 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 IZUMO3Q5VZ72 239 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 AFTPHQ6ULP2 937 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 APLFQ8IW19 511 aaPredicted RBP15.18■□□□□ 0.02
VPS33A-206ENST00000542310 OR52E1Q8NGJ3 308 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 THAP4Q8WY91 577 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 CPT1BQ92523 772 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 FERD3LQ96RJ6 166 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 RANBP9Q96S59 729 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 TWSG1Q9GZX9 223 aa15.18■□□□□ 0.02
VPS33A-206ENST00000542310 GSAPA4D1B5 854 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 CDC14CA4D256 554 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 C2orf74A8MZ97 194 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 MAP3K7O43318 606 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 KRT86O43790 486 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 NTRK1P04629 796 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 FURINP09958 794 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 PRSS56P0CW18 603 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 ARCN1P48444 511 aaKnown RBP15.17■□□□□ 0.02
VPS33A-206ENST00000542310 RPS15P62841 145 aaKnown RBP15.17■□□□□ 0.02
VPS33A-206ENST00000542310 SEMA5AQ13591 1074 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 TCTN3Q6NUS6 607 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 AMIGO1Q86WK6 493 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 PTRH1Q86Y79 214 aaKnown RBP15.17■□□□□ 0.02
VPS33A-206ENST00000542310 CLDN19Q8N6F1 224 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 DNAAF3Q8N9W5 541 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 OR52K1Q8NGK4 314 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 OR13J1Q8NGT2 312 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 ATG4AQ8WYN0 398 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 TFGQ92734 400 aaPredicted RBP15.17■□□□□ 0.02
VPS33A-206ENST00000542310 RNF31Q96EP0 1072 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 TTC1Q99614 292 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 HGH1Q9BTY7 390 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 TLR10Q9BXR5 811 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 EPN3Q9H201 632 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 SMARCAL1Q9NZC9 954 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 MAN2B2Q9Y2E5 1009 aa15.17■□□□□ 0.02
VPS33A-206ENST00000542310 SNRNP200O75643 2136 aaKnown RBP15.17■□□□□ 0.02
VPS33A-206ENST00000542310 PIPSLA2A3N6 862 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 SLC9B1P1A6NJY1 282 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 BTN3A3O00478 584 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 KLK3P07288 261 aaPredicted RBP15.16■□□□□ 0.02
VPS33A-206ENST00000542310 RAB40ALP0C0E4 278 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 OR56A5P0C7T3 313 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 PDHA2P29803 388 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 PRDX3P30048 256 aaKnown RBP15.16■□□□□ 0.02
VPS33A-206ENST00000542310 SHMT2P34897 504 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 PREPP48147 710 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 ACVR1Q04771 509 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 GPS2Q13227 327 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 NLRP9Q7RTR0 991 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 SLC13A5Q86YT5 568 aaPredicted RBP15.16■□□□□ 0.02
VPS33A-206ENST00000542310 TBC1D21Q8IYX1 336 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 DSELQ8IZU8 1212 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 SGSM3Q96HU1 749 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 PPM1MQ96MI6 270 aa15.16■□□□□ 0.02
VPS33A-206ENST00000542310 CHRNA10Q9GZZ6 450 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms