RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 SH3BGRP55822 239 aaPredicted RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 LINC01547P58512 204 aaPredicted RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 PRAMEP78395 509 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 PDE1BQ01064 536 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 YWHAHQ04917 246 aaPredicted RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 NIPAL4Q0D2K0 466 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 COX10Q12887 443 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 IFT88Q13099 833 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 ZNF234Q14588 700 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 LASP1Q14847 261 aaKnown RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 DECR1Q16698 335 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 GSTA3Q16772 222 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 CEP85LQ5SZL2 805 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 STXBP5Q5T5C0 1151 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 IRAK1BP1Q5VVH5 260 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 KLHL10Q6JEL2 608 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 DUS1LQ6P1R4 473 aaKnown RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 C16orf87Q6PH81 154 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 SARM1Q6SZW1 724 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 CCDC186Q7Z3E2 898 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 HAPLN4Q86UW8 402 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 KLHDC9Q8NEP7 349 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 DMBX1Q8NFW5 382 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 OR5R1Q8NH85 324 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 FBXO30Q8TB52 745 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 PSPC1Q8WXF1 523 aaKnown RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 MRPS27Q92552 414 aaKnown RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 PIGTQ969N2 578 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 WBP2Q969T9 261 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 ZNF501Q96CX3 271 aaPredicted RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 MMABQ96EY8 250 aaPredicted RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 ALG14Q96F25 216 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 GRAMD2BQ96HH9 432 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 LINC00615Q96LM1 132 aaPredicted RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 RAB3IPQ96QF0 476 aaPredicted RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 MTERF1Q99551 399 aaKnown RBP3.41□□□□□ -1.86
LEMD3-204ENST00000542032 C1QTNF5Q9BXJ0 243 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 FUT8Q9BYC5 575 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 C1orf21Q9H246 121 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 SH2D4AQ9H788 454 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 ASAH2Q9NR71 780 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 SLC6A13Q9NSD5 602 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 CACNG4Q9UBN1 327 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 LAMP5Q9UJQ1 280 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 ACSL5Q9ULC5 683 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 KLHL20Q9Y2M5 609 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 TAF1P21675 1872 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 ATAD2BQ9ULI0 1458 aa3.41□□□□□ -1.86
LEMD3-204ENST00000542032 TRAV34A0A0B4J273 112 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 CDRT15L2A8MXV6 281 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SCAMP1O15126 338 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 ZBTB43O43298 467 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 EDIL3O43854 480 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SLCO2B1O94956 709 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SNX4O95219 450 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 TPOP07202 933 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 TRIM21P19474 475 aaKnown RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 MC5RP33032 325 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 TCF7P36402 384 aaPredicted RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 CCR10P46092 362 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 LMAN1P49257 510 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 LIG4P49917 911 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 NPY4RP50391 375 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 GPC3P51654 580 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 STAT2P52630 851 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SLC12A3P55017 1021 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 EEF1A1P68104 462 aaKnown RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 CSNK2A1P68400 391 aaPredicted RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 RUNX1T1Q06455 604 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 FOXM1Q08050 763 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 CBX3Q13185 183 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 GRAPQ13588 217 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SNTB1Q13884 538 aaKnown RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 GTF2H2Q13888 395 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 IL11RAQ14626 422 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 DRAP1Q14919 205 aaPredicted RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SMU1Q2TAY7 513 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 CRY2Q49AN0 593 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 ZRANB3Q5FWF4 1079 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 CCNYL2Q5T2Q4 361 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 EEF1A1P5Q5VTE0 462 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 JADE1Q6IE81 842 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 KRT80Q6KB66 452 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 FBXL22Q6P050 247 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 GTF2H2CQ6P1K8 395 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 TMEM154Q6P9G4 183 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 CCBE1Q6UXH8 406 aaPredicted RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 ZNF852Q6ZMS4 543 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 DPPA4Q7L190 304 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SLC26A9Q7LBE3 791 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 CHST3Q7LGC8 479 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 NBPF5PQ86XG9 351 aaPredicted RBP3.4□□□□□ -1.87
LEMD3-204ENST00000542032 ZBTB44Q8NCP5 570 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 CSNK2A3Q8NEV1 391 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 KIF18AQ8NI77 898 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 FIBINQ8TAL6 211 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 THAP6Q8TBB0 222 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 SNED1Q8TER0 1413 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 POMGNT1Q8WZA1 660 aa3.4□□□□□ -1.87
LEMD3-204ENST00000542032 MR1Q95460 341 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms