RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TSPAN9O75954 239 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 EML2O95834 649 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 CLPTM1O96005 669 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 CSH1P0DML2 217 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 CSH2P0DML3 217 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 ALOX12P18054 663 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 TRIM21P19474 475 aaKnown RBP5.42□□□□□ -1.54
YBX3-210ENST00000540975 CLNS1AP54105 237 aaKnown RBP5.42□□□□□ -1.54
YBX3-210ENST00000540975 ITGA9Q13797 1035 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 DCAF10Q5QP82 559 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 KRT79Q5XKE5 535 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 ZNF790Q6PG37 636 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 FIGLAQ6QHK4 219 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 KBTBD6Q86V97 674 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 ZNF843Q8N446 348 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 DDHD1Q8NEL9 900 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 GRHL3Q8TE85 626 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 ZFAND2BQ8WV99 257 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 CDRT15Q96T59 188 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 ASCL2Q99929 193 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 KIFC3Q9BVG8 833 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 MAF1Q9H063 256 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 PSD3Q9NYI0 1048 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 TBC1D29Q9UFV1 150 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 A0A1W2PRB8 838 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 ANKRD18BA2A2Z9 1011 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 DNM1LO00429 736 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 XRCC3O43542 346 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 ZNF821O75541 412 aaPredicted RBP5.41□□□□□ -1.54
YBX3-210ENST00000540975 EDN1P05305 212 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 ZNF883P0CG24 379 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 GABRA5P31644 462 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 NRIP1P48552 1158 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 MEA1Q16626 185 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 IGSF11Q5DX21 431 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 FFAR4Q5NUL3 377 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 ZC2HC1BQ5TFG8 222 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 ZNF383Q8NA42 475 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 PAPD5Q8NDF8 572 aaKnown RBP5.41□□□□□ -1.54
YBX3-210ENST00000540975 OR1J1Q8NGS3 322 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 OR2AJ1Q8NGZ0 328 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 MOSPD2Q8NHP6 518 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 VN1R1Q9GZP7 353 aa5.41□□□□□ -1.54
YBX3-210ENST00000540975 ADD3Q9UEY8 706 aaKnown RBP5.41□□□□□ -1.54
YBX3-210ENST00000540975 PTRH2Q9Y3E5 179 aaKnown RBP5.41□□□□□ -1.54
YBX3-210ENST00000540975 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 IGHV4-61A0A0C4DH41 118 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 hCG_1807616A0A1W2PRN6 198 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 PRAMEF11O60813 436 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 PIGNO95427 931 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 IGHV4-59P01825 116 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 VPREB1P12018 145 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 CDK3Q00526 305 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 EPS8Q12929 822 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 CHAF1BQ13112 559 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 TMEM187Q14656 261 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 NR1D2Q14995 579 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 PCLAFQ15004 111 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 WTAPQ15007 396 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 MAPRE1Q15691 268 aaKnown RBP5.4□□□□□ -1.54
YBX3-210ENST00000540975 LCE1FQ5T754 118 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 CYP4A22Q5TCH4 519 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 DHRS7BQ6IAN0 325 aaPredicted RBP5.4□□□□□ -1.54
YBX3-210ENST00000540975 TMCO3Q6UWJ1 677 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 PPFIBP2Q8ND30 876 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 PTPMT1Q8WUK0 201 aaPredicted RBP5.4□□□□□ -1.54
YBX3-210ENST00000540975 GIMAP5Q96F15 307 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 ARRDC1-AS1Q9H2J1 176 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 MMP27Q9H306 513 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 DPAGT1Q9H3H5 408 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 ZNF71Q9NQZ8 489 aaPredicted RBP5.4□□□□□ -1.54
YBX3-210ENST00000540975 OSER1Q9NX31 292 aa5.4□□□□□ -1.54
YBX3-210ENST00000540975 CENPBP07199 599 aaPredicted RBP5.39□□□□□ -1.55
YBX3-210ENST00000540975 WNT5AP41221 380 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 TUBB2AQ13885 445 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 RILPL1Q5EBL4 403 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 SLC16A9Q7RTY1 509 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 CEP57Q86XR8 500 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 FBXO39Q8N4B4 442 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 OR5M8Q8NGP6 311 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 CALML4Q96GE6 196 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 BTBD10Q9BSF8 475 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 TUBB2BQ9BVA1 445 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 TEX12Q9BXU0 123 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 FGF22Q9HCT0 170 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 BCCIPQ9P287 314 aaKnown RBP eCLIP5.39□□□□□ -1.55
YBX3-210ENST00000540975 OSGIN1Q9UJX0 560 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 MRPS28Q9Y2Q9 187 aaKnown RBP5.39□□□□□ -1.55
YBX3-210ENST00000540975 PYGO1Q9Y3Y4 419 aa5.39□□□□□ -1.55
YBX3-210ENST00000540975 SH2B2O14492 632 aaPredicted RBP5.38□□□□□ -1.55
YBX3-210ENST00000540975 ATP6V0E1O15342 81 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 MED24O75448 989 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 PRKRAO75569 313 aaKnown RBP5.38□□□□□ -1.55
YBX3-210ENST00000540975 PORP16435 677 aaPredicted RBP5.38□□□□□ -1.55
YBX3-210ENST00000540975 EFNA1P20827 205 aaPredicted RBP5.38□□□□□ -1.55
YBX3-210ENST00000540975 PSMC6P62333 389 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 CUL4AQ13619 759 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 P2RY6Q15077 328 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 GTDC1Q4AE62 458 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 MZT2BQ6NZ67 158 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms