RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 RPIAP49247 311 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 TBCCQ15814 346 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 PREPLQ4J6C6 727 aaPredicted RBP12□□□□□ -0.49
AP003559.1-201ENST00000540906 DOK6Q6PKX4 331 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 FAM83HQ6ZRV2 1179 aaPredicted RBP12□□□□□ -0.49
AP003559.1-201ENST00000540906 GK5Q6ZS86 529 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 SNX32Q86XE0 403 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 DDIASQ8IXT1 998 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 CEP70Q8NHQ1 597 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 CFAP61Q8NHU2 1237 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 ASB2Q96Q27 587 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 HBEGFQ99075 208 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 TUBB6Q9BUF5 446 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 UBE2ZQ9H832 354 aaPredicted RBP12□□□□□ -0.49
AP003559.1-201ENST00000540906 IPPKQ9H8X2 491 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 EIF3FO00303 357 aaPredicted RBP12□□□□□ -0.49
AP003559.1-201ENST00000540906 AP1G1O43747 822 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 MGRN1O60291 552 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 PRAMEF4O60810 478 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 ATG13O75143 517 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 TM7SF2O76062 418 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 SORBS2O94875 1100 aaKnown RBP12□□□□□ -0.49
AP003559.1-201ENST00000540906 MATN4O95460 622 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 MLYCDO95822 493 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 CAPN1P07384 714 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 HOXB2P14652 356 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 ITGAXP20702 1163 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 TFF2Q03403 129 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 IRF4Q15306 451 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 BCL7AQ4VC05 210 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 TMEM31Q5JXX7 168 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 PRAMEF9Q5VWM5 478 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 SULT1C3Q6IMI6 304 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 PNCKQ6P2M8 343 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 TMEM92Q6UXU6 159 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 NUDT18Q6ZVK8 323 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 C11orf96Q7Z7L8 435 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 HEATR4Q86WZ0 1026 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 RALGPS2Q86X27 583 aaPredicted RBP12□□□□□ -0.49
AP003559.1-201ENST00000540906 TMPRSS6Q8IU80 811 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 SUGP1Q8IWZ8 645 aaKnown RBP12□□□□□ -0.49
AP003559.1-201ENST00000540906 AFAP1L2Q8N4X5 818 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 TP53I13Q8NBR0 393 aaPredicted RBP12□□□□□ -0.49
AP003559.1-201ENST00000540906 OR9I1Q8NGQ6 314 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 FAM131CQ96AQ9 280 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 PYCR2Q96C36 320 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 PARVBQ9HBI1 364 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 TM7SF3Q9NS93 570 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 FBXL12Q9NXK8 326 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 ARL15Q9NXU5 204 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 SEC23IPQ9Y6Y8 1000 aaKnown RBP12□□□□□ -0.49
AP003559.1-201ENST00000540906 VCANP13611 3396 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 C9JVG2 144 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 NPC1O15118 1278 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 HNRNPCL1O60812 293 aaKnown RBP11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 RNASEH1O60930 286 aaKnown RBP11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 PAK4O96013 591 aaPredicted RBP11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 C8GP07360 202 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 SLC6A12P48065 614 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 NME5P56597 212 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 PPP2CBP62714 309 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 PPP2CAP67775 309 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 SMAD4Q13485 552 aaKnown RBP11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 PTK2BQ14289 1009 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 SYTL3Q4VX76 610 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 XKR7Q5GH72 579 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 NEK5Q6P3R8 708 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 ADAMTSL4Q6UY14 1074 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 TRAPPC5Q8IUR0 188 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 ASZ1Q8WWH4 475 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 HIC2Q96JB3 615 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 TRIM39Q9HCM9 518 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 TRPV5Q9NQA5 729 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 PRDM6Q9NQX0 595 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 SLC23A2Q9UGH3 650 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 RNF11Q9Y3C5 154 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 OR1A2Q9Y585 309 aa11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 TNPO3Q9Y5L0 923 aaKnown RBP11.99□□□□□ -0.49
AP003559.1-201ENST00000540906 K7EPI3 171 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 UBDO15205 165 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 PSIP1O75475 530 aaKnown RBP11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 CRCPO75575 148 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 POP7O75817 140 aaKnown RBP11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 FUCA1P04066 466 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 ANXA5P08758 320 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 GSTM1P09488 218 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 UROSP10746 265 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 PRDX6P30041 224 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 RASSF2P50749 326 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 ADPRHP54922 357 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 PKNOX1P55347 436 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 CDK3Q00526 305 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 GSTM4Q03013 218 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 CUL3Q13618 768 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 NFE2L1Q14494 772 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 GPR153Q6NV75 609 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 PAOXQ6QHF9 649 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 NEK10Q6ZWH5 1172 aa11.98□□□□□ -0.49
AP003559.1-201ENST00000540906 FAM124AQ86V42 546 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms