RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ATP5DP30049 168 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 STX2P32856 288 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CSF2RBP32927 897 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CD151P48509 253 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CLCN7P51798 805 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 EPHA4P54764 986 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CSE1LP55060 971 aaKnown RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CLDN6P56747 220 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 OR1D5P58170 312 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 TIAL1Q01085 375 aaKnown RBP eCLIP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 E2F1Q01094 437 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 PLOD1Q02809 727 aaPredicted RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 HSPA14Q0VDF9 509 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 FOXC1Q12948 553 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 GPR18Q14330 331 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 BRD3Q15059 726 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 TMED2Q15363 201 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 PLEKHS1Q5SXH7 462 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 RBM20Q5T481 1227 aaKnown RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 HES3Q5TGS1 186 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CDCP2Q5VXM1 449 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CEP128Q6ZU80 1094 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 TMEM26Q6ZUK4 368 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CYS1Q717R9 158 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 OTOAQ7RTW8 1153 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 VRK3Q8IV63 474 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 TRIM48Q8IWZ4 208 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 PALM2Q8IXS6 379 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 RBM12BQ8IXT5 1001 aaKnown RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 GSPT2Q8IYD1 628 aaKnown RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 ZBTB2Q8N680 514 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 WDR48Q8TAF3 677 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CD200R1Q8TD46 325 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 SH3KBP1Q96B97 665 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 FAM136AQ96C01 138 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CXorf40BQ96DE9 158 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 NDNQ99608 321 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 SLC30A3Q99726 388 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 AARSD1Q9BTE6 412 aaKnown RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 TSPYL1Q9H0U9 437 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CCDC68Q9H2F9 335 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 ANKZF1Q9H8Y5 726 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 LATS2Q9NRM7 1088 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 NSMCE4AQ9NXX6 385 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 GALPQ9UBC7 116 aa6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 CORO1CQ9ULV4 474 aaPredicted RBP6.81□□□□□ -1.32
LPCAT3-209ENST00000540060 UNC13CQ8NB66 2214 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 MED19A0JLT2 244 aaPredicted RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 IFRD1O00458 451 aaPredicted RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 B4GAT1O43505 415 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 DUX1O43812 170 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 HYAL3O43820 417 aaPredicted RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 TOP3BO95985 862 aaKnown RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 CHRM3P20309 590 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 CD9P21926 228 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 FDXRP22570 491 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 NDUFS1P28331 727 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 CD1CP29017 333 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 ALDH4A1P30038 563 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 CAPZBP47756 277 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 CCL7P80098 99 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 GPLD1P80108 840 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 BIRC2Q13490 618 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 NAB1Q13506 487 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 SPIDRQ14159 915 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 EFTUD2Q15029 972 aaKnown RBP eCLIP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 KYNUQ16719 465 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 KBTBD12Q3ZCT8 623 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 FAM45BPQ6NSW5 357 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 RBM44Q6ZP01 1051 aaKnown RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 C3orf62Q6ZUJ4 267 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 TMPRSS7Q7RTY8 843 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 TMPRSS9Q7Z410 1059 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 STRA8Q7Z7C7 330 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 PIM3Q86V86 326 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 ZC3HC1Q86WB0 502 aaKnown RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 TMPRSS12Q86WS5 348 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 GALNT15Q8N3T1 639 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 CHCHD4Q8N4Q1 142 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 DCBLD1Q8N8Z6 715 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 Q8N9G6 341 aaPredicted RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 EIF1ADQ8N9N8 165 aaKnown RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 SIDT2Q8NBJ9 832 aaKnown RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 OR5AR1Q8NGP9 310 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 OR5K2Q8NHB8 316 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 FAM45AQ8TCE6 357 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 FBF1Q8TES7 1133 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 RSC1A1Q92681 617 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 TFGQ92734 400 aaPredicted RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 CDKL2Q92772 493 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 ATXN7L3BQ96GX2 97 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 VPS39Q96JC1 886 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 GFM1Q96RP9 751 aaKnown RBP6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 SLC38A3Q99624 504 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 GPR21Q99679 349 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 RBBP8Q99708 897 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 CPNE1Q99829 537 aa6.8□□□□□ -1.32
LPCAT3-209ENST00000540060 NUDT22Q9BRQ3 303 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms