RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 ERVK-10P10266 1014 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 CD59P13987 128 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 PSMA3P25788 255 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 NDUFS1P28331 727 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 FMO4P31512 558 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 FOXN2P32314 431 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 SKIV2L2P42285 1042 aaKnown RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 CARSP49589 748 aaKnown RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 CDKN1CP49918 316 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 CLCNKAP51800 687 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 SIM1P81133 766 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 E2F1Q01094 437 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 MGAT5Q09328 741 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 RPA4Q13156 261 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 ILKQ13418 452 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 BOP1Q14137 746 aaKnown RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 SEPT7Q16181 437 aaKnown RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 BCL7AQ4VC05 210 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 TPRG1LQ5T0D9 272 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 KLHL35Q6PF15 583 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 DBX2Q6ZNG2 339 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 KIAA0408Q6ZU52 694 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 TAOK1Q7L7X3 1001 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 CILP2Q8IUL8 1156 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 CTAGE3PQ8IX95 158 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 RBM12BQ8IXT5 1001 aaKnown RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 PIANPQ8IYJ0 282 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 CNPY4Q8N129 248 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 RAB42Q8N4Z0 105 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 CLDN19Q8N6F1 224 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 FAM181AQ8N9Y4 354 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 DEFB124Q8NES8 71 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 WDR48Q8TAF3 677 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 HM13Q8TCT9 377 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 VPS39Q96JC1 886 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 LINC00615Q96LM1 132 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 APOLD1Q96LR9 279 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 FOPNLQ96NB1 174 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 SLC38A3Q99624 504 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 CLEC4MQ9H2X3 399 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 TCEAL2Q9H3H9 227 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 SYNDIG1Q9H7V2 258 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 SARS2Q9NP81 518 aaKnown RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 GRHL1Q9NZI5 618 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 FBXO5Q9UKT4 447 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 PADI4Q9UM07 663 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 KCNK6Q9Y257 313 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 CRYL1Q9Y2S2 319 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 TEX264Q9Y6I9 313 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 ZNF318Q5VUA4 2279 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 MYO18AQ92614 2054 aaKnown RBP6.35□□□□□ -1.39
SNHG1-212ENST00000539975 SHROOM3Q8TF72 1996 aa6.35□□□□□ -1.39
SNHG1-212ENST00000539975 IGLV3-16A0A075B6K0 115 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 TRBV23OR9-2A0A075B6M9 112 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 ZCWPW2A0A1B0GU75 182 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 E7ESA3 106 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 TRIM38O00635 465 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 GAPDHSO14556 408 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 GPR39O43194 453 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 NUDT21O43809 227 aaKnown RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 VPS26AO75436 327 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 KCNK5O95279 499 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 GP1BAP07359 652 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 ESRRAP11474 423 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 CKMT1AP12532 417 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 F3P13726 295 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 PKMP14618 531 aaKnown RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 GLB1P16278 677 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 AK4P27144 223 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 RPL10P27635 214 aaKnown RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 ALDH4A1P30038 563 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 MAPK9P45984 424 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 ARCN1P48444 511 aaKnown RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 PRLHRP49683 370 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 RGS4P49798 205 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 CTSCP53634 463 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 ADARP55265 1226 aaKnown RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 HHEXQ03014 270 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 DMPKQ09013 629 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 HSPA14Q0VDF9 509 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 CTBP1Q13363 440 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 FRG1Q14331 258 aaKnown RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 BRD3Q15059 726 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 PLCL1Q15111 1095 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 SHBQ15464 509 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 SMAD1Q15797 465 aaKnown RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 C14orf28Q4W4Y0 310 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 LGSNQ5TDP6 509 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 METRNLQ641Q3 311 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 LRRC8EQ6NSJ5 796 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 ARMC6Q6NXE6 501 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 UNC5AQ6ZN44 842 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 CYS1Q717R9 158 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 DGLUCYQ7Z3D6 616 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 LDB1Q86U70 411 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 SLC26A11Q86WA9 606 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 EIF1ADQ8N9N8 165 aaKnown RBP6.34□□□□□ -1.39
SNHG1-212ENST00000539975 CCL4L1Q8NHW4 92 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 MAGEC3Q8TD91 643 aa6.34□□□□□ -1.39
SNHG1-212ENST00000539975 SEC14L1Q92503 715 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms