RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 IQCF5A8MTL0 148 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 GOLGA8KD6RF30 607 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 GOLGA8TH3BQL2 631 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 CAPN5O15484 640 aaPredicted RBP13.34□□□□□ -0.27
CD9-208ENST00000538834 ESR1P03372 595 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 PAMP19021 973 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 MPSTP25325 297 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 RBMS1P29558 406 aaKnown RBP13.34□□□□□ -0.27
CD9-208ENST00000538834 RPL21P46778 160 aaKnown RBP13.34□□□□□ -0.27
CD9-208ENST00000538834 LEPRP48357 1165 aaKnown RBP13.34□□□□□ -0.27
CD9-208ENST00000538834 PCBP4P57723 403 aaKnown RBP13.34□□□□□ -0.27
CD9-208ENST00000538834 PPP1CAP62136 330 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 GRB7Q14451 532 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 RNF187Q5TA31 235 aaPredicted RBP13.34□□□□□ -0.27
CD9-208ENST00000538834 ZNF549Q6P9A3 640 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 GALNT7Q86SF2 657 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 CNTN4Q8IWV2 1026 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 TBC1D21Q8IYX1 336 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 ZNF248Q8NDW4 579 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 FLVCR1-AS1Q8TAF5 88 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 SNRNP27Q8WVK2 155 aaKnown RBP13.34□□□□□ -0.27
CD9-208ENST00000538834 ASZ1Q8WWH4 475 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 ELMO1Q92556 727 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 ZNF669Q96BR6 464 aaPredicted RBP13.34□□□□□ -0.27
CD9-208ENST00000538834 STAMBPL1Q96FJ0 436 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 SNF8Q96H20 258 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 SLC41A2Q96JW4 573 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 PWWP2AQ96N64 755 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 TAAR9Q96RI9 348 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 KRT12Q99456 494 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 CD180Q99467 661 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 ERP44Q9BS26 406 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 NAT9Q9BTE0 207 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 DDA1Q9BW61 102 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 DPH1Q9BZG8 443 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 GRHL1Q9NZI5 618 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 SAMD15Q9P1V8 674 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 KLHL42Q9P2K6 505 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 CDC23Q9UJX2 597 aa13.34□□□□□ -0.27
CD9-208ENST00000538834 F8W8V4 182 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 RAD51CO43502 376 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 KIF1CO43896 1103 aaKnown RBP13.33□□□□□ -0.28
CD9-208ENST00000538834 BANF1O75531 89 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 TTC4O95801 387 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 AMD1P17707 334 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 PGAM1P18669 254 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 GABRB3P28472 473 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 ITGA8P53708 1063 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 TIAL1Q01085 375 aaKnown RBP eCLIP13.33□□□□□ -0.28
CD9-208ENST00000538834 CRYMQ14894 314 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 LONRF1Q17RB8 773 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 PLEKHS1Q5SXH7 462 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 NAPRTQ6XQN6 538 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 SDCCAG8Q86SQ7 713 aaPredicted RBP13.33□□□□□ -0.28
CD9-208ENST00000538834 ADGRF3Q8IZF5 1079 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 UNC5BQ8IZJ1 945 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 KRT222Q8N1A0 295 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 PHC3Q8NDX5 983 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 OR52E1Q8NGJ3 308 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 OR5K2Q8NHB8 316 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 SEC14L1Q92503 715 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 USP7Q93009 1102 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 PMEPA1Q969W9 287 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 PANX3Q96QZ0 392 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 NRTNQ99748 197 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 IL1RAPL1Q9NZN1 696 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 FOXJ2Q9P0K8 574 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 WHRNQ9P202 907 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 GALPQ9UBC7 116 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 PISDQ9UG56 409 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 GNPTGQ9UJJ9 305 aa13.33□□□□□ -0.28
CD9-208ENST00000538834 IGHV5-51A0A0C4DH38 117 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 EFCAB8A8MWE9 144 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 H3BMM5 538 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 BTN3A3O00478 584 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 KPNA5O15131 536 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 PRAMEF10O60809 474 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 NDUFS3O75489 264 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 MATN4O95460 622 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 TUBB4AP04350 444 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 MSL3P1P0C860 447 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 JMJD7P0C870 316 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 PKMP14618 531 aaKnown RBP13.32□□□□□ -0.28
CD9-208ENST00000538834 NELFEP18615 380 aaKnown RBP13.32□□□□□ -0.28
CD9-208ENST00000538834 CD9P21926 228 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 CD82P27701 267 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 ITPKBP27987 946 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 ATP5DP30049 168 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 CSTF2P33240 577 aaKnown RBP eCLIP13.32□□□□□ -0.28
CD9-208ENST00000538834 CLCN7P51798 805 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 TLE3Q04726 772 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 CLN3Q13286 438 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 KYNUQ16719 465 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 DNAJC21Q5F1R6 531 aaKnown RBP13.32□□□□□ -0.28
CD9-208ENST00000538834 SPANXN3Q5MJ09 141 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 CASC4Q6P4E1 433 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 KLHL35Q6PF15 583 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 KMT5CQ86Y97 462 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 DENND6AQ8IWF6 608 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 SPACA3Q8IXA5 215 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms