RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 MTERF2Q49AM1 385 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 VPS26BQ4G0F5 336 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 NOL9Q5SY16 702 aaKnown RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 TDRD10Q5VZ19 366 aaKnown RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 KDM4DQ6B0I6 523 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 TMPRSS11AQ6ZMR5 421 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 GPRIN3Q6ZVF9 776 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 CUZD1Q86UP6 607 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 RNF130Q86XS8 419 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 CCDC36Q8IYA8 594 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 CHCHD4Q8N4Q1 142 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 CLRN3Q8NCR9 226 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 UTP15Q8TED0 518 aaKnown RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 ELMO1Q92556 727 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 ZNF516Q92618 1163 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 MYDGFQ969H8 173 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 MOCOSQ96EN8 888 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 ATXN7L3BQ96GX2 97 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 ZC3HAV1LQ96H79 300 aaKnown RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 QKIQ96PU8 341 aaKnown RBP eCLIP12.23□□□□□ -0.451e-15■■■■■ 33.6
USP3-203ENST00000538686 P2RX7Q99572 595 aaKnown RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 SEC22CQ9BRL7 303 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 LRRC3Q9BY71 257 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 SRRQ9GZT4 340 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 LHX5Q9H2C1 402 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 PPIL3Q9H2H8 161 aaKnown RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 SAV1Q9H4B6 383 aaPredicted RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 CAB39LQ9H9S4 337 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 TMEM39AQ9NV64 488 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 LYARQ9NX58 379 aaKnown RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 GPRC5BQ9NZH0 403 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 ACAD8Q9UKU7 415 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 PRR12Q9ULL5 1215 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 PCDHB14Q9Y5E9 798 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 GMPPBQ9Y5P6 360 aa12.23□□□□□ -0.45
USP3-203ENST00000538686 OAS3Q9Y6K5 1087 aaKnown RBP12.23□□□□□ -0.45
USP3-203ENST00000538686 A0A0A0MRY4 1105 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 A0A0B4J293 547 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 A0A1W2PP18 115 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 PQLC2LA1A4F0 135 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 GRXCR2A6NFK2 248 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 LINC01387J3KSC0 135 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 NOBOXO60393 691 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 PEX14O75381 377 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 CST1P01037 141 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 HMGCRP04035 888 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 LCKP06239 509 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 CDK1P06493 297 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 SLC2A4P14672 509 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 NPR1P16066 1061 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 LIMK1P53667 647 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 USP10Q14694 798 aaKnown RBP12.22□□□□□ -0.45
USP3-203ENST00000538686 FSCN1Q16658 493 aaKnown RBP12.22□□□□□ -0.45
USP3-203ENST00000538686 IER5Q5VY09 327 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 OVCH2Q7RTZ1 564 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 DPP9Q86TI2 863 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 TRIM48Q8IWZ4 208 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 FAM181AQ8N9Y4 354 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 ATOH1Q92858 354 aaPredicted RBP12.22□□□□□ -0.45
USP3-203ENST00000538686 RIT1Q92963 219 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 RNF31Q96EP0 1072 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 SPATA13Q96N96 652 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 DPYSL5Q9BPU6 564 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 ZNF670Q9BS34 389 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 RACGAP1Q9H0H5 632 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 GHITMQ9H3K2 345 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 APOBEC3GQ9HC16 384 aaKnown RBP12.22□□□□□ -0.45
USP3-203ENST00000538686 KIF25Q9UIL4 384 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 PHF11Q9UIL8 331 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 ADAM30Q9UKF2 790 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 SLC39A10Q9ULF5 831 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 ACOT9Q9Y305 439 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 PHLPP1O60346 1717 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 A0A0U1RQS6 177 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 RHOBTB1O94844 696 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 WDR47O94967 919 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 SRCP12931 536 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 CDH8P55286 799 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 KCNK10P57789 538 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 CRADDP78560 199 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 PCDH1Q08174 1060 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 GRIK2Q13002 908 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 DMP1Q13316 513 aaPredicted RBP12.22□□□□□ -0.45
USP3-203ENST00000538686 SEMA3AQ14563 771 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 SYT16Q17RD7 645 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 PROX2Q3B8N5 592 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 JADE1Q6IE81 842 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 NECAB2Q7Z6G3 386 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 GHDCQ8N2G8 530 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 WDTC1Q8N5D0 677 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 TMEM161BQ8NDZ6 487 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 CYP2W1Q8TAV3 490 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 DCAF4Q8WV16 495 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 ST8SIA2Q92186 375 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 SLC9A6Q92581 669 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 KIAA1143Q96AT1 154 aaPredicted RBP12.22□□□□□ -0.45
USP3-203ENST00000538686 PHF21AQ96BD5 680 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 PYCR2Q96C36 320 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 C19orf60Q96EN9 201 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 TEPSINQ96N21 525 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms