RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 NUP210LQ5VU65 1888 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 CNTRLQ7Z7A1 2325 aa13.58□□□□□ -0.24
SMARCA4-206ENST00000538456 ANKRD12Q6UB98 2062 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 C2CD3Q4AC94 2353 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 DOCK10Q96BY6 2186 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 ZNF487B1APH4 448 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 MATN2O00339 956 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 BTN3A3O00478 584 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 STX7O15400 261 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 H2AFZP0C0S5 128 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 CBSLP0DN79 551 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 TNNT1P13805 278 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 PRF1P14222 555 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 CBSP35520 551 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 ZBED6P86452 979 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 PRKD1Q15139 912 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 SLC1A5Q15758 541 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 ZNF385CQ66K41 422 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 IGFL3Q6UXB1 125 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 H2AFVQ71UI9 128 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 GPR135Q8IZ08 494 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 ZADH2Q8N4Q0 377 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 TM9SF4Q92544 642 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 N4BP2L2Q92802 583 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 MARVELD3Q96A59 401 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 OXNAD1Q96HP4 312 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 MRGPRX2Q96LB1 330 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 IP6K3Q96PC2 410 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 TRAPPC9Q96Q05 1148 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 FERD3LQ96RJ6 166 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 PITPNM3Q9BZ71 974 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 P4HTMQ9NXG6 502 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 KLHL8Q9P2G9 620 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 GPN3Q9UHW5 284 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 NENFQ9UMX5 172 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 PCDHGA10Q9Y5H3 936 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 HEBP2Q9Y5Z4 205 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 ARL5AQ9Y689 179 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 POLQO75417 2590 aa13.57□□□□□ -0.24
SMARCA4-206ENST00000538456 FBN2P35556 2912 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 CCDC66A2RUB6 948 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 LRRTM2O43300 516 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 SNRNP200O75643 2136 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 HBQ1P09105 142 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 MSL3P1P0C860 447 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 ZFXP17010 805 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 POU3F2P20265 443 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 HADHAP40939 763 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 WASHC5Q12768 1159 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 SSPNQ14714 243 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 NAA30Q147X3 362 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 DEFB110Q30KQ9 67 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 BCL7AQ4VC05 210 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 ODF2Q5BJF6 829 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 CRB2Q5IJ48 1285 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 TRIM73Q86UV7 250 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 TMEM151BQ8IW70 566 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 ST6GALNAC3Q8NDV1 305 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 HM13Q8TCT9 377 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 TFB1MQ8WVM0 346 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 RBM41Q96IZ5 413 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 HGH1Q9BTY7 390 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 FSD1LQ9BXM9 530 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 XKR8Q9H6D3 395 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 ASB8Q9H765 288 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 AGPAT4Q9NRZ5 378 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 TMEM63CQ9P1W3 806 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 LCMT1Q9UIC8 334 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 CDYLQ9Y232 598 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 CSAG2Q9Y5P2 127 aa13.56□□□□□ -0.24
SMARCA4-206ENST00000538456 CSMD2Q7Z408 3487 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 KLHL33A6NCF5 533 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 C2orf74A8MZ97 194 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 HNRNPRO43390 633 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 SGTAO43765 313 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 OR2B3O76000 313 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 SRP72O76094 671 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 IPO13O94829 963 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 EPOP01588 193 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 PYGMP11217 842 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 PECAM1P16284 738 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 ITGA3P26006 1051 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 HIF1AQ16665 826 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 CYP2A13Q16696 494 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 Q6ZS92 163 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 PPP1R32Q7Z5V6 425 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 VSIG1Q86XK7 387 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 SLC34A3Q8N130 599 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 PHC3Q8NDX5 983 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 OR4K2Q8NGD2 314 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 OR52E1Q8NGJ3 308 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 DCUN1D1Q96GG9 259 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 LINC00615Q96LM1 132 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 GBP4Q96PP9 640 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 BARD1Q99728 777 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 C17orf62Q9BQA9 187 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 CCM2Q9BSQ5 444 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 UNKQ9C0B0 810 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 ACTR10Q9NZ32 417 aa13.55□□□□□ -0.24
SMARCA4-206ENST00000538456 IFT80Q9P2H3 777 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms