RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 KHDC1Q4VXA5 237 aaKnown RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 PIP5KL1Q5T9C9 394 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 GUSBP11Q6P575 273 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 PACS1Q6VY07 963 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 C17orf64Q86WR6 236 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 TMCO5AQ8N6Q1 288 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 ACVR1CQ8NER5 493 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 SLC37A2Q8TED4 501 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 TSGA13Q96PP4 275 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 PPP1R2P1Q96PQ5 205 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 TRIT1Q9H3H1 467 aaKnown RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 SNX15Q9NRS6 342 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 WHRNQ9P202 907 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 DHCR7Q9UBM7 475 aaKnown RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 ZFR2Q9UPR6 939 aaKnown RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 COLEC10Q9Y6Z7 277 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 BTN3A3O00478 584 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 H2AFYO75367 372 aaKnown RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 ATXN1LP0C7T5 689 aaKnown RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 OTX2P32243 289 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 GNGT1P63211 74 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 ACTN3Q08043 901 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 KLF1Q13351 362 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 NNATQ16517 81 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 HIST2H2ACQ16777 129 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 DUOXA1Q1HG43 343 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 IRAK1BP1Q5VVH5 260 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 FAM219BQ5XKK7 198 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 DUPD1Q68J44 220 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 HIST2H2AA3Q6FI13 130 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 RANBP10Q6VN20 620 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 ZNF655Q8N720 491 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 SELENOMQ8WWX9 145 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 RAB7BQ96AH8 199 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 AARSD1Q9BTE6 412 aaKnown RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 C1orf50Q9BV19 199 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 SPATS2LQ9NUQ6 558 aaKnown RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 GALPQ9UBC7 116 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 MYO7BQ6PIF6 2116 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 SPTBN5Q9NRC6 3674 aaKnown RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 CENPEQ02224 2701 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 LNP1A1A4G5 178 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 MAGEB16A2A368 324 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 SLC9B1P1A6NJY1 282 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 KMOO15229 486 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 RIPK2O43353 540 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 HYAL3O43820 417 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 BGNP21810 368 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 MLLT3P42568 568 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 AGTR2P50052 363 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 HSF5Q4G112 596 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 SPANXN3Q5MJ09 141 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 TPRG1LQ5T0D9 272 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 SYDE1Q6ZW31 735 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 DGLUCYQ7Z3D6 616 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 VSIG1Q86XK7 387 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 TCP10LQ8TDR4 215 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 FRS2Q8WU20 508 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 RSC1A1Q92681 617 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 RAD51AP1Q96B01 352 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 JSRP1Q96MG2 331 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 PLEKHG4BQ96PX9 1271 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 CEP44Q9C0F1 390 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 ANKZF1Q9H8Y5 726 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 EQTNQ9NQ60 294 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 KCNE2Q9Y6J6 123 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 NAV2Q8IVL1 2488 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 NDUFAB1O14561 156 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 POLR1CO15160 346 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 CAPN5O15484 640 aaPredicted RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 NDUFB5O43674 189 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 CER1O95813 267 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 CD160O95971 181 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 PRLP01236 227 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 CXCR2P25025 360 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 ALDH3A1P30838 453 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 HTR7P34969 479 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 MMP12P39900 470 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 CCR10P46092 362 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 KPNA2P52292 529 aaKnown RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 FBXW4P57775 412 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 YBX1P67809 324 aaKnown RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 ARHGAP8P85298 464 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 SEMA3BQ13214 749 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 KCNC3Q14003 757 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 ALG11Q2TAA5 492 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 CCSMST1Q4G0I0 132 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 GLE1Q53GS7 698 aaKnown RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 LDLRAP1Q5SW96 308 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 EMBQ6PCB8 327 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 SFRP1Q8N474 314 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 MMGT1Q8N4V1 131 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 VMP1Q96GC9 406 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 GAL3ST4Q96RP7 486 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 ELAC2Q9BQ52 826 aaKnown RBP7.08□□□□□ -1.28
MSH6-209ENST00000538136 TRPC4Q9UBN4 977 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 PCYOX1Q9UHG3 505 aa7.08□□□□□ -1.28
MSH6-209ENST00000538136 CPSF4O95639 269 aaKnown RBP7.07□□□□□ -1.28
MSH6-209ENST00000538136 SLC2A4P14672 509 aa7.07□□□□□ -1.28
MSH6-209ENST00000538136 ALOX15P16050 662 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms