RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 FNIP1Q8TF40 1166 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 SLC35G5Q96KT7 338 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 OR51V1Q9H2C8 321 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 DHX33Q9H6R0 707 aaKnown RBP11.03□□□□□ -0.64
LINC00346-201ENST00000538077 ING3Q9NXR8 418 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 NCDNQ9UBB6 729 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 RAPGEFL1Q9UHV5 662 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 GABRQQ9UN88 632 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 SCGNO76038 276 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 CDKN1CP49918 316 aaPredicted RBP11.03□□□□□ -0.64
LINC00346-201ENST00000538077 POU5F1Q01860 360 aaKnown RBP11.03□□□□□ -0.64
LINC00346-201ENST00000538077 IL10RBQ08334 325 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 IL18R1Q13478 541 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 FBXO42Q6P3S6 717 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 DNAJA3Q96EY1 480 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 ZNF570Q96NI8 536 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 RTKNQ9BST9 563 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 UNC93B1Q9H1C4 597 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 PRDM8Q9NQV8 689 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 MAGEL2Q9UJ55 1249 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 CA14Q9ULX7 337 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 PDPK1O15530 556 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 CHRNA1P02708 482 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 GKP32189 559 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 ALG1LQ6GMV1 187 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 IKBIPQ70UQ0 350 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 NCSTNQ92542 709 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 DGAT2Q96PD7 388 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 FBXL12Q9NXK8 326 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 NR2E1Q9Y466 385 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 INSL6Q9Y581 213 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 ATRNO75882 1429 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 LYPLA2O95372 231 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 LYNP07948 512 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 CREB5Q02930 508 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 RIPK1Q13546 671 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 PUM1Q14671 1186 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00346-201ENST00000538077 ABHD13Q7L211 337 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 ZNF781Q8N8C0 355 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 OR4E2Q8NGC2 313 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 LRCH1Q9Y2L9 728 aa11.03□□□□□ -0.64
LINC00346-201ENST00000538077 IGLV3-22A0A075B6J6 115 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 MYOCOSA0A1B0GUC4 107 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 NOBOXO60393 691 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 SNAP91O60641 907 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 RSL1D1O76021 490 aaKnown RBP11.02□□□□□ -0.64
LINC00346-201ENST00000538077 UNC5CO95185 931 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 TSHRP16473 764 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 SP140Q13342 867 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 SLC1A5Q15758 541 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 ANO7Q6IWH7 933 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 FSTL4Q6MZW2 842 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 CLEC20AQ6ZU45 233 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 BRD7Q9NPI1 651 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 WASF2Q9Y6W5 498 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 TCRBV21S2A2A0A5A6 115 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 WFS1O76024 890 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 NOL4O94818 638 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 UBXN7O94888 489 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 ETS2P15036 469 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 ACVRL1P37023 503 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 CCT3P49368 545 aaKnown RBP11.02□□□□□ -0.64
LINC00346-201ENST00000538077 KCNQ1P51787 676 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 MXD1Q05195 221 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 ZCCHC12Q6PEW1 402 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 OR10A6Q8NH74 314 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 SLC44A1Q8WWI5 657 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 SPOCK2Q92563 424 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 TNFRSF25Q93038 417 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 SIPA1Q96FS4 1042 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 PCDHGC3Q9UN70 934 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 CYP8B1Q9UNU6 501 aa11.02□□□□□ -0.64
LINC00346-201ENST00000538077 J3KR12 359 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 HLA-DQB2P05538 268 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 IL7RP16871 459 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 NR4A1P22736 598 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 GPD2P43304 727 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 TOR1AIP1Q5JTV8 583 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 RANBP3LQ86VV4 465 aaPredicted RBP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 TLR6Q9Y2C9 796 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 WNT9AO14904 365 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 TYRP1P17643 537 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 CHRNB2P17787 502 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 CASRP41180 1078 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 EIF1AXP47813 144 aaKnown RBP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 STARP49675 285 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 ACTR3P61158 418 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF846Q147U1 533 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 MYBPC3Q14896 1274 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 GPR68Q15743 365 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 ZNF648Q5T619 568 aaPredicted RBP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 APLFQ8IW19 511 aaPredicted RBP11.02□□□□□ -0.65
LINC00346-201ENST00000538077 SDCBP2Q9H190 292 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 LRMDAQ9H2I8 198 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 PPM1HQ9ULR3 514 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 MFHAS1Q9Y4C4 1052 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 CLCA3PQ9Y6N3 262 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 BCKDKO14874 412 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 FGF18O76093 207 aa11.02□□□□□ -0.65
LINC00346-201ENST00000538077 C8orf89P0DMQ9 161 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms