RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 LSM8O95777 96 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 CSF2RAP15509 400 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 IL1R2P27930 398 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 MAP2K4P45985 399 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 CDH6P55285 790 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 BCAR1P56945 870 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 ARHGAP1Q07960 439 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 TNK1Q13470 666 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 FAM98BQ52LJ0 330 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 CES5AQ6NT32 575 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 SYVN1Q86TM6 617 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 TAGAPQ8N103 731 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 PTERQ96BW5 349 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 NSMCE2Q96MF7 247 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 RBM4BQ9BQ04 359 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 FEM1AQ9BSK4 669 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 WACQ9BTA9 647 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 RBM4Q9BWF3 364 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 CLEC4MQ9H2X3 399 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 ELOVL6Q9H5J4 265 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 FLRT1Q9NZU1 646 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 TTC24A2A3L6 582 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 POLBP06746 335 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 GGT5P36269 586 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 BTN1A1Q13410 526 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 PSMD5Q16401 504 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 RUNDC3AQ59EK9 446 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF704Q6ZNC4 412 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 PROSER1Q86XN7 944 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 DBF4BQ8NFT6 615 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 SLC38A4Q969I6 547 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 TIFAQ96CG3 184 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 QKIQ96PU8 341 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 FIZ1Q96SL8 496 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 COL20A1Q9P218 1284 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 MKL2Q9ULH7 1088 aa10.71□□□□□ -0.69
CLSTN3-207ENST00000537408 ARAP2Q8WZ64 1704 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 FAM20BO75063 409 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 LTFP02788 710 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 HTR1AP08908 422 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 DPY19L1Q2PZI1 675 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 RFX4Q33E94 735 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 SEZ6Q53EL9 994 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 NPNTQ6UXI9 565 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 NLGN4XQ8N0W4 816 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 STX19Q8N4C7 294 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 CHCHD4Q8N4Q1 142 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 OR7D4Q8NG98 312 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 TRAPPC12Q8WVT3 735 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 FCGR1BQ92637 280 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 TMBIM1Q969X1 311 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 C11orf84Q9BUA3 381 aaPredicted RBP10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 ITPAQ9BY32 194 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 ALOXE3Q9BYJ1 711 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 ERVK-18Q9QC07 812 aa10.71□□□□□ -0.7
CLSTN3-207ENST00000537408 TRPM7Q96QT4 1865 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 PITPNM1O00562 1244 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 NME4O00746 187 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 GNB5O14775 395 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 SSX5O60225 188 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 TULP3O75386 442 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 MAFO75444 373 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 MAOBP27338 520 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 CRYBB1P53674 252 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 IL1RL1Q01638 556 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 SLAMF1Q13291 335 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 MAB21L1Q13394 359 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ELOAQ14241 798 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 BNIPLQ7Z465 357 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 SAMD11Q96NU1 681 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 FNIP2Q9P278 1114 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 GMPR2Q9P2T1 348 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF639Q9UID6 485 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 NAALAD2Q9Y3Q0 740 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 C3orf70A6NLC5 250 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 PRPSAP2O60256 369 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 GOT2P00505 430 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 MT-ND1P03886 318 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 C2P06681 752 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 AGXTP21549 392 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 CDH5P33151 784 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 SESN2P58004 480 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 FLI1Q01543 452 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 PCBP1Q15365 356 aaKnown RBP eCLIP10.7□□□□□ -0.73e-14■■■■■ 42.9
CLSTN3-207ENST00000537408 ZNF470Q6ECI4 717 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF782Q6ZMW2 699 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 STRA8Q7Z7C7 330 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 VWA5B2Q8N398 1253 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ZNF540Q8NDQ6 660 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ST8SIA4Q92187 359 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 PHF21AQ96BD5 680 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 HYLS1Q96M11 299 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 HSD17B14Q9BPX1 270 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 CDADC1Q9BWV3 514 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 ACSL5Q9ULC5 683 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 CSNK1G3Q9Y6M4 447 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 KAT6AQ92794 2004 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 BTN3A1O00481 513 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 DPYSL4O14531 572 aa10.7□□□□□ -0.7
CLSTN3-207ENST00000537408 MRPS14O60783 128 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms