RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 PAPSS2O95340 614 aaPredicted RBP11.2□□□□□ -0.62
TNC-211ENST00000537320 VEGFBP49765 207 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 HMGCS1Q01581 520 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 ATP13A5Q4VNC0 1218 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 NAIF1Q69YI7 327 aaPredicted RBP11.2□□□□□ -0.62
TNC-211ENST00000537320 LRRTM3Q86VH5 581 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 FAM129CQ86XR2 697 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 ZCCHC7Q8N3Z6 543 aaKnown RBP11.2□□□□□ -0.62
TNC-211ENST00000537320 VANGL1Q8TAA9 524 aaPredicted RBP11.2□□□□□ -0.62
TNC-211ENST00000537320 SLC13A3Q8WWT9 602 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 R3HDMLQ9H3Y0 253 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 SEC14L3Q9UDX4 400 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 TRPS1Q9UHF7 1281 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 MRTO4Q9UKD2 239 aaKnown RBP11.2□□□□□ -0.62
TNC-211ENST00000537320 POMPQ9Y244 141 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 SH3GLB1Q9Y371 365 aa11.2□□□□□ -0.62
TNC-211ENST00000537320 CACNA1SQ13698 1873 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 LOC100506127A0A0U1RQW1 187 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 SMIM31A0A1B0GVY4 71 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 C2orf78A6NCI8 922 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 CENPXA8MT69 81 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 KLF11O14901 512 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 ACP5P13686 325 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 NCK1P16333 377 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 NR1H2P55055 460 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 ERVK-8P63133 956 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 NFKB2Q00653 900 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 SCAPQ12770 1279 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 MTAPQ13126 283 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 RNF44Q7L0R7 432 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 GPR135Q8IZ08 494 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 C2CD4AQ8NCU7 369 aaPredicted RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 SLC38A2Q96QD8 506 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 BRINP2Q9C0B6 783 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 ZC4H2Q9NQZ6 224 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 RUVBL1Q9Y265 456 aaKnown RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 DDX60Q8IY21 1712 aaKnown RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 FAM25AB3EWG3 89 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 FAM25CB3EWG5 89 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 FAM25GB3EWG6 89 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 ATP1B2P14415 290 aaPredicted RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 PLA2G16P53816 162 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 TP53INP2Q8IXH6 220 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 IMP4Q96G21 291 aaKnown RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 FCRL3Q96P31 734 aaPredicted RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 AKTIPQ9H8T0 292 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 POLMQ9NP87 494 aaPredicted RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 KLHL1Q9NR64 748 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 FBXW2Q9UKT8 454 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 POLR1DQ9Y2S0 133 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 FADS3Q9Y5Q0 445 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 RPL5P46777 297 aaKnown RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 DGUOKQ16854 277 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 SLC39A5Q6ZMH5 540 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 MACC1Q6ZN28 852 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 FGD2Q7Z6J4 655 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 IRF7Q92985 503 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 PSKH2Q96QS6 385 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 OLFM1Q99784 485 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 MRM3Q9HC36 420 aaKnown RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 ARHGEF3Q9NR81 526 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 MAT2BQ9NZL9 334 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 ATP6V1HQ9UI12 483 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 GLI3P10071 1580 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 EDDM13A0A1B0GTR0 161 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 E7ESA3 106 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 H3BNH8 94 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 TEX28O15482 410 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 MAFKO60675 156 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 CYP11A1P05108 521 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 CCDC159P0C7I6 412 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 BMP7P18075 431 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 CDH3P22223 829 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 CCNFP41002 786 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 HTRA3P83110 453 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 C16orf72Q14CZ0 275 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 GCNT6Q5T4J0 391 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 GALNT18Q6P9A2 607 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 CEP68Q76N32 757 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 PLD6Q8N2A8 252 aaKnown RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 POMGNT2Q8NAT1 580 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 GLB1L3Q8NCI6 653 aaPredicted RBP11.19□□□□□ -0.62
TNC-211ENST00000537320 C11orf65Q8NCR3 313 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 FEM1AQ9BSK4 669 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 B4GALT6Q9UBX8 382 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 GSTK1Q9Y2Q3 226 aa11.19□□□□□ -0.62
TNC-211ENST00000537320 AKAP11Q9UKA4 1901 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 MMP20O60882 483 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 HLA-EP13747 358 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 ZNF30P17039 623 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 CREB5Q02930 508 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 STX4Q12846 297 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 PCLAFQ15004 111 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 NDUFA9Q16795 377 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 CLLU1OSQ5K130 101 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
TNC-211ENST00000537320 TMCO2Q7Z6W1 182 aaPredicted RBP11.18□□□□□ -0.62
TNC-211ENST00000537320 C19orf18Q8NEA5 215 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 MRGPRX2Q96LB1 330 aa11.18□□□□□ -0.62
TNC-211ENST00000537320 MIPEPQ99797 713 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms