RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 PDE10AQ9Y233 779 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 SNX13Q9Y5W8 968 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 DENND4AQ7Z401 1863 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 DHRS12A0PJE2 317 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 SERTM1A2A2V5 107 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 GFYI3L273 518 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 MANBAO00462 879 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 HNRNPRO43390 633 aaKnown RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 SGTAO43765 313 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 RSL1D1O76021 490 aaKnown RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 GUCA1CO95843 209 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 HNRNPA1P09651 372 aaKnown RBP eCLIP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 OR56A5P0C7T3 313 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 BMPR1AP36894 532 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 GRIA2P42262 883 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 POLR2LP62875 67 aaKnown RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 ZXDCQ2QGD7 858 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 TIGD2Q4W5G0 525 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 RFTN2Q52LD8 501 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 RABL3Q5HYI8 236 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 PLEKHS1Q5SXH7 462 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 RNF220Q5VTB9 566 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 NANOGP8Q6NSW7 305 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 HID1Q8IV36 788 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 ASB11Q8WXH4 323 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 APOL5Q9BWW9 433 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 EPB41L1Q9H4G0 881 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 NANOGQ9H9S0 305 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 PKD2L2Q9NZM6 624 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 C7orf72A4D263 438 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 RGS14O43566 566 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 RFPL2O75678 378 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 AP2A2O94973 939 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 STAMBPO95630 424 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 HMOX2P30519 316 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 SEMG2Q02383 582 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 LIPEQ05469 1076 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 MAD2L1Q13257 205 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 INPP5AQ14642 412 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 NR6A1Q15406 480 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 AP5B1Q2VPB7 878 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 INTS11Q5TA45 600 aaKnown RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 PLPP4Q5VZY2 271 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 PPP4R4Q6NUP7 873 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 FAM110BQ8TC76 370 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 SPPL3Q8TCT6 385 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 COQ10BQ9H8M1 238 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 INTS7Q9NVH2 962 aaKnown RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 SLAMF8Q9P0V8 285 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 PCDH10Q9P2E7 1040 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 DKK3Q9UBP4 350 aa9.12□□□□□ -0.95
UBE3B-207ENST00000537063 TSR3Q9UJK0 312 aaKnown RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 POLR3HQ9Y535 204 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-207ENST00000537063 STK16O75716 305 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 ANXA5P08758 320 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 ATP1B2P14415 290 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 EPB42P16452 691 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 GDF5P43026 501 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 UBE3AQ05086 875 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 FBXO46Q6PJ61 603 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 MBOAT1Q6ZNC8 495 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 DDHD1Q8NEL9 900 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 OR8J3Q8NGG0 315 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 EME1Q96AY2 570 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 RAD9AQ99638 391 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 EGFL8Q99944 293 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 OSBPL11Q9BXB4 747 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 LINC00597Q9H2U6 94 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 SLC32A1Q9H598 525 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 RNF11Q9Y3C5 154 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 C5orf67F2Z3F1 127 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 KATNA1O75449 491 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 PAPLNO95428 1278 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 FGBP02675 491 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 UMPSP11172 480 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 CYP2A6P11509 494 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 ACPPP15309 386 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 HRH2P25021 359 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 HNMTP50135 292 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 MYBPC1Q00872 1141 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 PPIGQ13427 754 aaKnown RBP eCLIP9.11□□□□□ -0.955e-6■■■■□ 20.2
UBE3B-207ENST00000537063 PWP1Q13610 501 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 APOFQ13790 326 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 BOP1Q14137 746 aaKnown RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 LY6G5CQ5SRR4 150 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 HENMT1Q5T8I9 393 aaKnown RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 SLC2A7Q6PXP3 512 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 NECAB2Q7Z6G3 386 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 CARM1Q86X55 608 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 SPPL2CQ8IUH8 684 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 KLHDC8AQ8IYD2 350 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 MFSD2AQ8NA29 543 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 CCDC115Q96NT0 180 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 KCTD14Q9BQ13 255 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-207ENST00000537063 HEPHQ9BQS7 1158 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 BEGAINQ9BUH8 593 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 PARVBQ9HBI1 364 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 RAD18Q9NS91 495 aa9.11□□□□□ -0.95
UBE3B-207ENST00000537063 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms