RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ZSCAN5DPP0CG00 497 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 TPSB2P20231 275 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 NDUFS1P28331 727 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 NPY2RP49146 381 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 CDKN1CP49918 316 aaPredicted RBP12.13□□□□□ -0.47
PRKDC-207ENST00000536483 TMPRSS15P98073 1019 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 KLRB1Q12918 225 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 TPSAB1Q15661 275 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 DBN1Q16643 649 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 PCID2Q5JVF3 399 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 LYPLAL1Q5VWZ2 237 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 CLEC18BQ6UXF7 455 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 PRUNE1Q86TP1 453 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 RASGRP3Q8IV61 690 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 TRIM48Q8IWZ4 208 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 CARFQ8N187 725 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 DNAAF3Q8N9W5 541 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 CLEC18CQ8NCF0 446 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 ACTRT1Q8TDG2 376 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 NAP1L3Q99457 506 aaPredicted RBP12.13□□□□□ -0.47
PRKDC-207ENST00000536483 IL22Q9GZX6 179 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 TWSG1Q9GZX9 223 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 OR52A5Q9H2C5 316 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 KCNF1Q9H3M0 494 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 FAM96AQ9H5X1 160 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 KIR3DX1Q9H7L2 352 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 VPS37BQ9H9H4 285 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 NEU2Q9Y3R4 380 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 TCAF1Q9Y4C2 921 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 CCDC162PA2VCL2 907 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 RASSF9O75901 435 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 GP1BBP13224 206 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 CXCR5P32302 372 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 KCNJ1P48048 391 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 MLLT10P55197 1068 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 PLOD1Q02809 727 aaPredicted RBP12.12□□□□□ -0.47
PRKDC-207ENST00000536483 IL11RAQ14626 422 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 ZRANB3Q5FWF4 1079 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 LRRC8BQ6P9F7 803 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 KLHL35Q6PF15 583 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 PPP1R21Q6ZMI0 780 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 ZNF534Q76KX8 674 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 DET1Q7L5Y6 550 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 TMEM135Q86UB9 458 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 CFAP206Q8IYR0 622 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 TEX19Q8NA77 164 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 RSC1A1Q92681 617 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 HDAC10Q969S8 669 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 MIB2Q96AX9 1013 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 STAMBPL1Q96FJ0 436 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 ZDHHC12Q96GR4 267 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 ZNF778Q96MU6 729 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 CD180Q99467 661 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 KIFC1Q9BW19 673 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 WWP1Q9H0M0 922 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 ZNF768Q9H5H4 540 aaKnown RBP12.12□□□□□ -0.47
PRKDC-207ENST00000536483 COG4Q9H9E3 785 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 MRM3Q9HC36 420 aaKnown RBP12.12□□□□□ -0.47
PRKDC-207ENST00000536483 TREX1Q9NSU2 369 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 PIH1D1Q9NWS0 290 aaKnown RBP12.12□□□□□ -0.47
PRKDC-207ENST00000536483 MAN2B2Q9Y2E5 1009 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 HEBP2Q9Y5Z4 205 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 COLEC10Q9Y6Z7 277 aa12.12□□□□□ -0.47
PRKDC-207ENST00000536483 USP9YO00507 2555 aaPredicted RBP12.11□□□□□ -0.47
PRKDC-207ENST00000536483 CDC14CA4D256 554 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 MKRN2OSH3BPM6 223 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 LIN7AO14910 233 aaPredicted RBP12.11□□□□□ -0.47
PRKDC-207ENST00000536483 SPAG6O75602 509 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 PRSS56P0CW18 603 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 LMAN1P49257 510 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 KCNJ11Q14654 390 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 CCDC38Q502W7 563 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 CACHD1Q5VU97 1274 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 TCTN3Q6NUS6 607 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 AFTPHQ6ULP2 937 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 FAM92BQ6ZTR7 304 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 TAS2R42Q7RTR8 314 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 KMT5CQ86Y97 462 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 MPP5Q8N3R9 675 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 FAM26EQ8N5C1 309 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 TAB3Q8N5C8 712 aaPredicted RBP12.11□□□□□ -0.47
PRKDC-207ENST00000536483 CLDN19Q8N6F1 224 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 GPR150Q8NGU9 434 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 OR4L1Q8NH43 312 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 SLC41A2Q96JW4 573 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 TTC1Q99614 292 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 TFB2MQ9H5Q4 396 aaKnown RBP12.11□□□□□ -0.47
PRKDC-207ENST00000536483 KCND1Q9NSA2 647 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 SLC2A6Q9UGQ3 507 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 SLC24A2Q9UI40 661 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 LNPEPQ9UIQ6 1025 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 KCND3Q9UK17 655 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 PSMD13Q9UNM6 376 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 POLHQ9Y253 713 aa12.11□□□□□ -0.47
PRKDC-207ENST00000536483 SLC5A10A0PJK1 596 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 PIPSLA2A3N6 862 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 OR5K3A6NET4 321 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 F8W8V4 182 aa12.1□□□□□ -0.47
PRKDC-207ENST00000536483 CREG1O75629 220 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms