RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 KIAA1191Q96A73 305 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 TLCD1Q96CP7 247 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 ATP6V1G3Q96LB4 118 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 VPS11Q9H270 941 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 CENPHQ9H3R5 247 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 RDH14Q9HBH5 336 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 EVA1BQ9NVM1 165 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 DNAAF2Q9NVR5 837 aaKnown RBP15.88■□□□□ 0.13
VAMP1-205ENST00000535927 TAAR2Q9P1P5 351 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 NCDNQ9UBB6 729 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 MID2Q9UJV3 735 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 PNMA8BQ9ULN7 279 aaPredicted RBP15.88■□□□□ 0.13
VAMP1-205ENST00000535927 PRKAB1Q9Y478 270 aa15.88■□□□□ 0.13
VAMP1-205ENST00000535927 TPRP12270 2363 aaKnown RBP15.88■□□□□ 0.13
VAMP1-205ENST00000535927 A6NCN8 305 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 PABPN1LA6NDY0 278 aaKnown RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 SYCE1LA8MT33 242 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 COPEO14579 308 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 PHGDHO43175 533 aaKnown RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 ZW10O43264 779 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 PSIP1O75475 530 aaKnown RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 SASH3O75995 380 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 TSPAN12O95859 305 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 CATP04040 527 aaKnown RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 PYGBP11216 843 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 ENGP17813 658 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 EPHA8P29322 1005 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 PBLDP30039 288 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 AP1S2P56377 157 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 CCDC153Q494R4 210 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 LAYNQ6UX15 382 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 CMC1Q7Z7K0 106 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 RASGRP3Q8IV61 690 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 SRRM1Q8IYB3 904 aaKnown RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 CPNE9Q8IYJ1 553 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 TBC1D21Q8IYX1 336 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 MCOLN3Q8TDD5 553 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 LMX1AQ8TE12 382 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 SAP25Q8TEE9 199 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 TFGQ92734 400 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 SH3KBP1Q96B97 665 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 LINGO1Q96FE5 620 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 MRPL57Q9BQC6 102 aaKnown RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 SLC12A9Q9BXP2 914 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 IQCGQ9H095 443 aaKnown RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 OSGEPL1Q9H4B0 414 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 STN1Q9H668 368 aaKnown RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 UCK1Q9HA47 277 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 TM7SF3Q9NS93 570 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 NLGN3Q9NZ94 848 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 GALPQ9UBC7 116 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 RUVBL2Q9Y230 463 aaKnown RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 KCNK6Q9Y257 313 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 DNAJC16Q9Y2G8 782 aa15.87■□□□□ 0.13
VAMP1-205ENST00000535927 PCYT1BQ9Y5K3 369 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-205ENST00000535927 NCOR2Q9Y618 2525 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 A0A1W2PPM1 405 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 PDZK1P1A8MUH7 402 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 TM9SF1O15321 606 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 YY2O15391 372 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 PRPF4O43172 522 aaKnown RBP eCLIP15.86■□□□□ 0.13
VAMP1-205ENST00000535927 HIST1H2AGP0C0S8 130 aaPredicted RBP15.86■□□□□ 0.13
VAMP1-205ENST00000535927 CD1DP15813 335 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 HIST1H2ADP20671 130 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 CYP2A7P20853 494 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 MAP4P27816 1152 aaKnown RBP15.86■□□□□ 0.13
VAMP1-205ENST00000535927 CDKL1Q00532 357 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 CSHL1Q14406 222 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 ZNF542PQ5EBM4 170 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 TMEM207Q6UWW9 146 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 DBX2Q6ZNG2 339 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 FAM83HQ6ZRV2 1179 aaPredicted RBP15.86■□□□□ 0.13
VAMP1-205ENST00000535927 SLC9B2Q86UD5 537 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 PIM3Q86V86 326 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 EXOC3L1Q86VI1 746 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 RAB42Q8N4Z0 105 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 BANPQ8N9N5 519 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 FAM181AQ8N9Y4 354 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 FAM46DQ8NEK8 389 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 RAD51AP1Q96B01 352 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 APOPT1Q96IL0 206 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 HIST1H2AHQ96KK5 128 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 SLC30A3Q99726 388 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 HIST1H2AJQ99878 128 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 H2AFJQ9BTM1 129 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 PARVBQ9HBI1 364 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 POT1Q9NUX5 634 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 TBC1D29Q9UFV1 150 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 TMEM131Q92545 1883 aa15.86■□□□□ 0.13
VAMP1-205ENST00000535927 ZNF839A8K0R7 811 aa15.85■□□□□ 0.13
VAMP1-205ENST00000535927 F7P08709 466 aaPredicted RBP15.85■□□□□ 0.13
VAMP1-205ENST00000535927 AK4P27144 223 aaPredicted RBP15.85■□□□□ 0.13
VAMP1-205ENST00000535927 PDHA2P29803 388 aa15.85■□□□□ 0.13
VAMP1-205ENST00000535927 RPIAP49247 311 aa15.85■□□□□ 0.13
VAMP1-205ENST00000535927 NAA20P61599 178 aa15.85■□□□□ 0.13
VAMP1-205ENST00000535927 ARHGAP19Q14CB8 494 aa15.85■□□□□ 0.13
VAMP1-205ENST00000535927 SHBQ15464 509 aa15.85■□□□□ 0.13
VAMP1-205ENST00000535927 PLA2G4EQ3MJ16 856 aa15.85■□□□□ 0.13
VAMP1-205ENST00000535927 C6orf132Q5T0Z8 1188 aa15.85■□□□□ 0.13
VAMP1-205ENST00000535927 KCTD16Q68DU8 428 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms