RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 STN1Q9H668 368 aaKnown RBP6.37□□□□□ -1.39
CDCA3-205ENST00000535871 MANSC1Q9H8J5 431 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 ERVMER34-1Q9H9K5 563 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 CAB39LQ9H9S4 337 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 PARVBQ9HBI1 364 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 NUDT4Q9NZJ9 180 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 TMEM216Q9P0N5 145 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 ATXN10Q9UBB4 475 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 SUSD2Q9UGT4 822 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 CD84Q9UIB8 345 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 EMCNQ9ULC0 261 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 RUVBL2Q9Y230 463 aaKnown RBP6.37□□□□□ -1.39
CDCA3-205ENST00000535871 CDYLQ9Y232 598 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 OARD1Q9Y530 152 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 HEBP2Q9Y5Z4 205 aa6.37□□□□□ -1.39
CDCA3-205ENST00000535871 GON4LQ3T8J9 2241 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SPAG17Q6Q759 2223 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 A0A0U1RQS6 177 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SPTY2D1-AS1A0A0U1RR47 76 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PRSS38A1L453 326 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 GMNCA6NCL1 334 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 A6NHS1 94 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 OR5K4A6NMS3 321 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 ZNF839A8K0R7 811 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 H3BM21 787 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 K7ESM1 405 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PLK4O00444 970 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 VILLO15195 856 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 GPR39O43194 453 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 ZBTB14O43829 449 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SMIM24O75264 130 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SNNO75324 88 aaPredicted RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SPAG7O75391 227 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 POP7O75817 140 aaKnown RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 TRIM16O95361 564 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 MLYCDO95822 493 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 FAM107AO95990 144 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PCCBP05166 539 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 HIST1H2AGP0C0S8 130 aaPredicted RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SBK3P0C264 359 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PRSS56P0CW18 603 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 MTHFD2P13995 350 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SLC2A4P14672 509 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 ZNF8P17098 575 aaPredicted RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 HIST1H2ADP20671 130 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 IMPDH1P20839 514 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 CYP2A7P20853 494 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 CCND1P24385 295 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 ACADLP28330 430 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 THOP1P52888 689 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PPP2CBP62714 309 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 HERVK_113P63132 956 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PPP2CAP67775 309 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 DLG1Q12959 904 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 CDC16Q13042 620 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SIM2Q14190 667 aaPredicted RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PCLAFQ15004 111 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PCBP2Q15366 365 aaKnown RBP eCLIP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 TGFBIQ15582 683 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 KHDC1Q4VXA5 237 aaKnown RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PEAR1Q5VY43 1037 aaPredicted RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SBSNQ6UWP8 590 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 ABRAXAS1Q6UWZ7 409 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 GCNT7Q6ZNI0 430 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 RNF165Q6ZSG1 346 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 RAB44Q7Z6P3 723 aaPredicted RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PDZD3Q86UT5 571 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PIM3Q86V86 326 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 GPSM1Q86YR5 675 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 GALNT13Q8IUC8 556 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 TRAPPC5Q8IUR0 188 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 NUDCD3Q8IVD9 361 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 RBM12BQ8IXT5 1001 aaKnown RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 LRRC34Q8IZ02 419 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PLD6Q8N2A8 252 aaKnown RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 FBXL6Q8N531 539 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SIDT2Q8NBJ9 832 aaKnown RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PLA2G15Q8NCC3 412 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 MCOLN3Q8TDD5 553 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 EEF1AKMT1Q8WVE0 214 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 ANKRD49Q8WVL7 239 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 ELMO1Q92556 727 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 ZNF75CPQ92670 426 aaPredicted RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 SGF29Q96ES7 293 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 LINGO1Q96FE5 620 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 LOXL4Q96JB6 756 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 FAR2Q96K12 515 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 HIST1H2AHQ96KK5 128 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 HHIPQ96QV1 700 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 HIST1H2AJQ99878 128 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 H2AFJQ9BTM1 129 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 RAB11FIP5Q9BXF6 653 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 ERVK-6Q9BXR3 956 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 DRC3Q9H069 523 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 C6orf106Q9H6K1 298 aaPredicted RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 C12orf49Q9H741 205 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 COG4Q9H9E3 785 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 EML4Q9HC35 981 aaKnown RBP6.36□□□□□ -1.39
CDCA3-205ENST00000535871 PFDN4Q9NQP4 134 aa6.36□□□□□ -1.39
CDCA3-205ENST00000535871 MBNL1Q9NR56 388 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms