RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 RBMXL3Q8N7X1 1067 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 ENDOVQ8N8Q3 282 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 FDCSPQ8NFU4 85 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 OR1L3Q8NH93 324 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 PROKR1Q8TCW9 393 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 BLOC1S5Q8TDH9 187 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 MR1Q95460 341 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 RBM41Q96IZ5 413 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 ELMO2Q96JJ3 720 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 TRAPPC9Q96Q05 1148 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 DEF6Q9H4E7 631 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 ASB8Q9H765 288 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 KLHL8Q9P2G9 620 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 SERTAD3Q9UJW9 196 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 G3BP2Q9UN86 482 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 SNX7Q9UNH6 387 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 PSMD13Q9UNM6 376 aa10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 TEP1Q99973 2627 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-206ENST00000535668 APCP25054 2843 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 SYCE3A1L190 88 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 SLC9B1P1A6NJY1 282 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 TCP11X1B4DZS4 312 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 CFAP99D6REC4 459 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 QSOX1O00391 747 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 CBFA2T2O43439 604 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 LDB2O43679 373 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 AGFG2O95081 481 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 CBX6O95503 412 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 RPS18P62269 152 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 TBX2Q13207 712 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 KCTD11Q693B1 232 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 SLC6A19Q695T7 634 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 ARMC6Q6NXE6 501 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 MRPL14Q6P1L8 145 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 SARM1Q6SZW1 724 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 IGFL2Q6UWQ7 119 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 TICAM1Q8IUC6 712 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 CNGA4Q8IV77 575 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 IPMKQ8NFU5 416 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 OR4K2Q8NGD2 314 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 FLVCR1-AS1Q8TAF5 88 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 COG1Q8WTW3 980 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 LCN9Q8WX39 176 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 TCTN2Q96GX1 697 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 COPS8Q99627 209 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 FICDQ9BVA6 458 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 NUDT9Q9BW91 350 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 FSD1LQ9BXM9 530 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 SLC29A3Q9BZD2 475 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 SRMSQ9H3Y6 488 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 COG4Q9H9E3 785 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 ACTR5Q9H9F9 607 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 VPS37BQ9H9H4 285 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 ZDHHC3Q9NYG2 299 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 GPR83Q9NYM4 423 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 OR6C2Q9NZP2 312 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 TRIM10Q9UDY6 481 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 PADI2Q9Y2J8 665 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 ARL5AQ9Y689 179 aa10.87□□□□□ -0.67
CLSTN3-206ENST00000535668 ARGFXA6NJG6 315 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 C2orf74A8MZ97 194 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 BTN3A3O00478 584 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 MAP3K7O43318 606 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 SPOPO43791 374 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 SEMA7AO75326 666 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 IPO13O94829 963 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 AGTP01019 485 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 LDLRP01130 860 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 ST6GAL1P15907 406 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 PTMSP20962 102 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 ACADLP28330 430 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 PREPP48147 710 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 CCL11P51671 97 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 DYNLT1P63172 113 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 MYBPC3Q14896 1274 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 ODF2Q5BJF6 829 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 SPESP1Q6UW49 350 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 PACS1Q6VY07 963 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 Q6ZS92 163 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 RAB43Q86YS6 212 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 CFAP206Q8IYR0 622 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 SLC25A41Q8N5S1 370 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 OR4E2Q8NGC2 313 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 OR2Y1Q8NGV0 311 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 SGSM3Q96HU1 749 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 PPM1MQ96MI6 270 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 GBP5Q96PP8 586 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 FERMT1Q9BQL6 677 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 SLC26A1Q9H2B4 701 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 SPTLC3Q9NUV7 552 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 RSPH14Q9UHP6 348 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 FKBPLQ9UIM3 349 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 CSMD1Q96PZ7 3565 aa10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 ANKRD17O75179 2603 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-206ENST00000535668 PCSK5Q92824 1860 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 BTNL10A8MVZ5 291 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 E7EQ34 232 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 BTN3A1O00481 513 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms