RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 FBXL3Q9UKT7 428 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 CCNKO75909 580 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 RPP14O95059 124 aaKnown RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 CFIP05156 583 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 IDSP22304 550 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 TIE1P35590 1138 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 CCR3P51677 355 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 SCN1BQ07699 218 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 PCBP1Q15365 356 aaKnown RBP eCLIP12.45□□□□□ -0.42
SPG11-203ENST00000535302 PLEKHG6Q3KR16 790 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 ATP13A5Q4VNC0 1218 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 CPNE9Q8IYJ1 553 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 OR2L8Q8NGY9 312 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 ACMSDQ8TDX5 336 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 CYB5D2Q8WUJ1 264 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 SPEF1Q9Y4P9 236 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 DHX15O43143 795 aaKnown RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 MTX2O75431 263 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 FUT2Q10981 343 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 ZFP69Q49AA0 526 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 C2orf27AQ580R0 203 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 KBTBD8Q8NFY9 601 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 COL1A2P08123 1366 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 A0A1W2PRU2 124 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 EDF1O60869 148 aaKnown RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 NR2F6P10588 404 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 LAMP2P13473 410 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 PLGLB1Q02325 96 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 UAP1L1Q3KQV9 507 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 PLCZ1Q86YW0 608 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 CPSF7Q8N684 471 aaKnown RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 ZNF781Q8N8C0 355 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 SLC44A1Q8WWI5 657 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 SLC38A3Q99624 504 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 GTPBP2Q9BX10 602 aaKnown RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 PER2O15055 1255 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 INSIG1O15503 277 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 HCRTO43612 131 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 MAGEA12P43365 314 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 GNPDA1P46926 289 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 PUS10Q3MIT2 529 aaKnown RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 CLEC4DQ8WXI8 215 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 ARHGEF4Q9NR80 690 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 STXBP5LQ9Y2K9 1186 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 CAPN8A6NHC0 703 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 TRAPPC6AO75865 159 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 CLDN9O95484 217 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 CRHR1P34998 444 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 RPL3P39023 403 aaKnown RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 CSKP41240 450 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 CDK9P50750 372 aaKnown RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 CLCQ05315 142 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 KLF10Q13118 480 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 HAVCR1Q96D42 359 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 PIWIL1Q96J94 861 aaKnown RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 CNDP2Q96KP4 475 aaKnown RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 FEM1AQ9BSK4 669 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 OTOL1A6NHN0 477 aaPredicted RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 TNFRSF11BO00300 401 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 SLC33A1O00400 549 aaPredicted RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 BCKDKO14874 412 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 NUDT17P0C025 328 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 SCGB2B2Q4G0G5 96 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 SLC26A9Q7LBE3 791 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 DENND6BQ8NEG7 585 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 GPN1Q9HCN4 374 aaPredicted RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 MAPRE3Q9UPY8 281 aa12.45□□□□□ -0.42
SPG11-203ENST00000535302 MAFBQ9Y5Q3 323 aaPredicted RBP12.45□□□□□ -0.42
SPG11-203ENST00000535302 RGS8P57771 180 aaPredicted RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 LILRA4P59901 499 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 PPP3R1P63098 170 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 CAP1Q01518 475 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 NFATC2Q13469 925 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 KLHL26Q53HC5 615 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 GALNT18Q6P9A2 607 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 P4HA3Q7Z4N8 544 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 CTU1Q7Z7A3 348 aaKnown RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 NPAS4Q8IUM7 802 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 FBXO22Q8NEZ5 403 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 MED28Q9H204 178 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 OR2AG1Q9H205 316 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 TMEM27Q9HBJ8 222 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 SH3BGRL2Q9UJC5 107 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 TCAF1Q9Y4C2 921 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 FKBP7Q9Y680 259 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 ALPIP09923 528 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 LHCGRP22888 699 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 CSTF1Q05048 431 aaKnown RBP12.44□□□□□ -0.42
SPG11-203ENST00000535302 MPP2Q14168 576 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 HERVK_113Q902F9 699 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 RTKNQ9BST9 563 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 FAM83DQ9H4H8 585 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 SP140LQ9H930 580 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 GKN1Q9NS71 199 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 FZD10Q9ULW2 581 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 KIAA1210Q9ULL0 1709 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 MYH10P35580 1976 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 YJEFN3A6XGL0 299 aa12.44□□□□□ -0.42
SPG11-203ENST00000535302 FMO3P31513 532 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms