RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 NUAK1O60285 661 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 MTX2O75431 263 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 KRT37O76014 449 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 MT-ND3P03897 115 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 WNT1P04628 370 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 ITGA2BP08514 1039 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 SNRPAP09012 282 aaKnown RBP12.08□□□□□ -0.48
SCARB1-204ENST00000535005 THEGLP0DJG4 465 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 ZNF8P17098 575 aaPredicted RBP12.08□□□□□ -0.48
SCARB1-204ENST00000535005 ITPKAP23677 461 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 FMO4P31512 558 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 HOXD12P35452 270 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 ETV4P43268 484 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 GTF2H3Q13889 308 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 PDE1CQ14123 709 aaPredicted RBP12.08□□□□□ -0.48
SCARB1-204ENST00000535005 PTK2BQ14289 1009 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 CTSL3PQ5NE16 218 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 ZNF648Q5T619 568 aaPredicted RBP12.08□□□□□ -0.48
SCARB1-204ENST00000535005 ATG16L1Q676U5 607 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 FAM45BPQ6NSW5 357 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 ARMCX6Q7L4S7 300 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 PHC3Q8NDX5 983 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 FAM45AQ8TCE6 357 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 WDR60Q8WVS4 1066 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 PPP1R14BQ96C90 147 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 MTBPQ96DY7 904 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 WDR92Q96MX6 357 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 NDNQ99608 321 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 MIR1-1HGQ9H1L0 117 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 STN1Q9H668 368 aaKnown RBP12.08□□□□□ -0.48
SCARB1-204ENST00000535005 LATS2Q9NRM7 1088 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 CHCHD3Q9NX63 227 aaKnown RBP12.08□□□□□ -0.48
SCARB1-204ENST00000535005 SUSD2Q9UGT4 822 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 PILRBQ9UKJ0 227 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 TMEM98Q9Y2Y6 226 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 DNMT3AQ9Y6K1 912 aaPredicted RBP12.08□□□□□ -0.48
SCARB1-204ENST00000535005 CEP192Q8TEP8 1941 aa12.08□□□□□ -0.48
SCARB1-204ENST00000535005 THADAQ6YHU6 1953 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 SPTY2D1-AS1A0A0U1RR47 76 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 BCAT2O15382 392 aaPredicted RBP12.07□□□□□ -0.48
SCARB1-204ENST00000535005 GSTM1P09488 218 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 OR56A5P0C7T3 313 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 ABCG1P45844 678 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 PRLHRP49683 370 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 THOP1P52888 689 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 CTSCP53634 463 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 POU4F1Q01851 419 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 GSTM4Q03013 218 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 ASPHQ12797 758 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 TPRG1LQ5T0D9 272 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 RBM20Q5T481 1227 aaKnown RBP12.07□□□□□ -0.48
SCARB1-204ENST00000535005 PTRHD1Q6GMV3 140 aaKnown RBP12.07□□□□□ -0.48
SCARB1-204ENST00000535005 ZC3H14Q6PJT7 736 aaKnown RBP12.07□□□□□ -0.48
SCARB1-204ENST00000535005 IZUMO2Q6UXV1 221 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 TIFABQ6ZNK6 161 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 SLC22A18ASQ8N1D0 253 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 OR56A4Q8NGH8 313 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 KCNJ9Q92806 393 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 ISL2Q96A47 359 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 SGF29Q96ES7 293 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 LOXL4Q96JB6 756 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 LINC00615Q96LM1 132 aaPredicted RBP12.07□□□□□ -0.48
SCARB1-204ENST00000535005 CCDC68Q9H2F9 335 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 KLHL42Q9P2K6 505 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 MED16Q9Y2X0 877 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 VWA7Q9Y334 891 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 SPAG17Q6Q759 2223 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 A0A1B0GTW7 788 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 FAM95CA0A1B0GW59 222 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 TLR4O00206 839 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 FUCA1P04066 466 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 GNSP15586 552 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 AFF3P51826 1226 aaKnown RBP12.07□□□□□ -0.48
SCARB1-204ENST00000535005 HECTD2Q5U5R9 776 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 TMEM220Q6QAJ8 160 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 SYT12Q8IV01 421 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 ZNF547Q8IVP9 402 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 KBTBD2Q8IY47 623 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 DCLK2Q8N568 766 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 ACVR1CQ8NER5 493 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 BTBD9Q96Q07 612 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 FGF22Q9HCT0 170 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 IRAK4Q9NWZ3 460 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 DGKBQ9Y6T7 804 aa12.07□□□□□ -0.48
SCARB1-204ENST00000535005 FANCMQ8IYD8 2048 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 B2RBV5 119 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 PEX1O43933 1283 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 FTH1P02794 183 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 IMPDH2P12268 514 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 FDXRP22570 491 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 MAGEA12P43365 314 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 CSRP3P50461 194 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 NXPH1P58417 271 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 TAS2R39P59534 338 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 TIAL1Q01085 375 aaKnown RBP eCLIP12.06□□□□□ -0.48
SCARB1-204ENST00000535005 CDC16Q13042 620 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 FZD2Q14332 565 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 TEAD4Q15561 434 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 MROH9Q5TGP6 573 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 DOK6Q6PKX4 331 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms