RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 FOXM1Q08050 763 aa13.12□□□□□ -0.31
BEST1-208ENST00000534553 TMEM115Q12893 351 aaPredicted RBP13.12□□□□□ -0.31
BEST1-208ENST00000534553 MTSS1LQ765P7 747 aa13.12□□□□□ -0.31
BEST1-208ENST00000534553 GALNT13Q8IUC8 556 aa13.12□□□□□ -0.31
BEST1-208ENST00000534553 PPFIBP2Q8ND30 876 aa13.12□□□□□ -0.31
BEST1-208ENST00000534553 ESAMQ96AP7 390 aa13.12□□□□□ -0.31
BEST1-208ENST00000534553 ABHD8Q96I13 439 aa13.12□□□□□ -0.31
BEST1-208ENST00000534553 FOPNLQ96NB1 174 aa13.12□□□□□ -0.31
BEST1-208ENST00000534553 CDRT15Q96T59 188 aa13.12□□□□□ -0.31
BEST1-208ENST00000534553 GDF15Q99988 308 aa13.12□□□□□ -0.31
BEST1-208ENST00000534553 HOPXQ9BPY8 73 aaPredicted RBP13.12□□□□□ -0.31
BEST1-208ENST00000534553 TACO1Q9BSH4 297 aaKnown RBP13.12□□□□□ -0.31
BEST1-208ENST00000534553 FBRSL1Q9HCM7 1045 aaKnown RBP13.12□□□□□ -0.31
BEST1-208ENST00000534553 TSR3Q9UJK0 312 aaKnown RBP13.12□□□□□ -0.31
BEST1-208ENST00000534553 GPR45Q9Y5Y3 372 aa13.12□□□□□ -0.31
BEST1-208ENST00000534553 IFRD1O00458 451 aaPredicted RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 SGTAO43765 313 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 LZTS3O60299 673 aaPredicted RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 RNASEH1O60930 286 aaKnown RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 RECQL5O94762 991 aaPredicted RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 KRT6AP02538 564 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 KRT6BP04259 564 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 EPHX1P07099 455 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 LAMP2P13473 410 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 HLA-EP13747 358 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 MAP4P27816 1152 aaKnown RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 MTHFRP42898 656 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 PTDSS1P48651 473 aaKnown RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 KRT6CP48668 564 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 EMX2Q04743 252 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 MESP2Q0VG99 397 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 ENPP2Q13822 863 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 GTF2H3Q13889 308 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 GRB7Q14451 532 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 POM121L1PQ3SYA9 428 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 ZFP1Q6P2D0 407 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 PAOXQ6QHF9 649 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 IL27RAQ6UWB1 636 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 HPS6Q86YV9 775 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 FNDC5Q8NAU1 212 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 CXorf40AQ8TE69 158 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 NPAS2Q99743 824 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 WRAP53Q9BUR4 548 aaKnown RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 TRMT61BQ9BVS5 477 aaKnown RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 HEBP1Q9NRV9 189 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 GID8Q9NWU2 228 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 LMCD1Q9NZU5 365 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 EPS15L1Q9UBC2 864 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 CROTQ9UKG9 612 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 COL4A3Q01955 1670 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 C17orf113A0A1B0GUU1 675 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 TRIM38O00635 465 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 LIN7AO14910 233 aaPredicted RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 SPINT1O43278 529 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 AP1G1O43747 822 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 VEGFDO43915 354 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 UGDHO60701 494 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 ULK1O75385 1050 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 PSIP1O75475 530 aaKnown RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 PDE5AO76074 875 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 CLDN9O95484 217 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 CATP04040 527 aaKnown RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 C6P13671 934 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 IL12RB1P42701 662 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 SLC6A12P48065 614 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 KCNK10P57789 538 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 PSME3P61289 254 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 ADAM15Q13444 863 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 RCAN2Q14206 197 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 ZNF423Q2M1K9 1284 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 C6orf136Q5SQH8 315 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 BLOC1S3Q6QNY0 202 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 TRIM46Q7Z4K8 759 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 FUNDC1Q8IVP5 155 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 FAM9CQ8IZT9 166 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 RASGEF1AQ8N9B8 481 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 NAT14Q8WUY8 206 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 FBXL8Q96CD0 374 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 CCDC124Q96CT7 223 aaKnown RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 LINC00615Q96LM1 132 aaPredicted RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 S100A14Q9HCY8 104 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 PRSS16Q9NQE7 514 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 SUCOQ9UBS9 1254 aaKnown RBP13.11□□□□□ -0.31
BEST1-208ENST00000534553 PTGDR2Q9Y5Y4 395 aa13.11□□□□□ -0.31
BEST1-208ENST00000534553 TRANK1O15050 2925 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 PRRC2BQ5JSZ5 2229 aaKnown RBP13.1□□□□□ -0.31
BEST1-208ENST00000534553 A0A1W2PP18 115 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 SLC5A10A0PJK1 596 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 TSPAN6O43657 245 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 SYNCRIPO60506 623 aaKnown RBP13.1□□□□□ -0.31
BEST1-208ENST00000534553 TBX10O75333 385 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 MTX2O75431 263 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 SLC22A3O75751 556 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 ADH1BP00325 375 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 NPPAP01160 153 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 GDI1P31150 447 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 TNFRSF4P43489 277 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 GPR1P46091 355 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 GRM2Q14416 872 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 NR6A1Q15406 480 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms