RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 COMMD9Q9P000 198 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 PDP1Q9P0J1 537 aaPredicted RBP6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 IRAK3Q9Y616 596 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 PPEF2O14830 753 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 ENTPD5O75356 428 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 REM1O75628 298 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 JMJD7P0C870 316 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 HLA-EP13747 358 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 EFNA1P20827 205 aaPredicted RBP6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 AHCYP23526 432 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 CAPGP40121 348 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 CCR8P51685 355 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 NRG3P56975 720 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 FASTKD3Q14CZ7 662 aaKnown RBP6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 LY6G5CQ5SRR4 150 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 P4HA3Q7Z4N8 544 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 OR13C4Q8NGS5 318 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 SLC35G5Q96KT7 338 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 ZNF304Q9HCX3 659 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 ADAP2Q9NPF8 381 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 DZANK1Q9NVP4 752 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 SCML2Q9UQR0 700 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 CFAP20Q9Y6A4 193 aaKnown RBP6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 TLL2Q9Y6L7 1015 aa6.29□□□□□ -1.4
UBQLN1-206ENST00000533705 TTC24A2A3L6 582 aaPredicted RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 FADS2P1A8MWK0 482 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 TNFRSF11BO00300 401 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SAP18O00422 153 aaKnown RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 LCA5LO95447 670 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 FABP3P05413 133 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 UNGP13051 313 aaPredicted RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 IL12RB1P42701 662 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 CLCN7P51798 805 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 HTRA3P83110 453 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 PRKD1Q15139 912 aaPredicted RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 NUP54Q7Z3B4 507 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 CYP2U1Q7Z449 544 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 GKN2Q86XP6 184 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 C12orf76Q8N812 135 aaPredicted RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 PIGXQ8TBF5 258 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 FBXL18Q96ME1 805 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SAMD11Q96NU1 681 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 FCRL4Q96PJ5 515 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SPATA9Q9BWV2 254 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 BCAS3Q9H6U6 928 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 RASSF1Q9NS23 344 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 CNTN6Q9UQ52 1028 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 PCDHB3Q9Y5E6 796 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 A8MUI8 341 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 MAGEB17A8MXT2 336 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 IDH3BO43837 385 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 KHDRBS3O75525 346 aaKnown RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SNAI1O95863 264 aaPredicted RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 ALOX5P09917 674 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 HAPLN1P10915 354 aaPredicted RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 IL7RP16871 459 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 ATP5A1P25705 553 aaKnown RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SLC7A1P30825 629 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 VIPR1P32241 457 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SLC1A2P43004 574 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SEPHS1P49903 392 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SLC10A7Q0GE19 358 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 METTL21CQ5VZV1 264 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 ANKRD46Q86W74 232 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 KLHDC7BQ96G42 594 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 C7orf26Q96N11 449 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 MTERF1Q99551 399 aaKnown RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 NUSAP1Q9BXS6 441 aaKnown RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 PNPLA3Q9NST1 481 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 PIGVQ9NUD9 493 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 FNIP2Q9P278 1114 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 GPC6Q9Y625 555 aaPredicted RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 K7EPI3 171 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 LEFTY2O00292 366 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 HAT1O14929 419 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 LAMTOR5O43504 91 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 PLIN3O60664 434 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 UGT2B11O75310 529 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SEC24AO95486 1093 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 HLA-DQB2P05538 268 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 CLUP10909 449 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 RPL10P27635 214 aaKnown RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 MNDAP41218 407 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 GRK6P43250 576 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 VEGFBP49765 207 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 HYAL2Q12891 473 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 ZNF460Q14592 562 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 PDK3Q15120 406 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SMU1Q2TAY7 513 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 MYLK3Q32MK0 819 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SLC30A6Q6NXT4 461 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 AAGABQ6PD74 315 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 RNF19BQ6ZMZ0 732 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 TMEM110Q86TL2 294 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 SPPL2CQ8IUH8 684 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 FSTL5Q8N475 847 aaPredicted RBP6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 TMEM156Q8N614 296 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 LRRC57Q8N9N7 239 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 ZNF384Q8TF68 577 aa6.28□□□□□ -1.4
UBQLN1-206ENST00000533705 ZNF516Q92618 1163 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms