RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 LMAN1P49257 510 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 PGDP52209 483 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 PRPSAP1Q14558 356 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 DARS2Q6PI48 645 aaKnown RBP16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 FAM198BQ6UWH4 519 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 SNX20Q7Z614 316 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 PHC3Q8NDX5 983 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 LCN9Q8WX39 176 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 CPT1BQ92523 772 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 CLIP3Q96DZ5 547 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 LRFN5Q96NI6 719 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 FERMT1Q9BQL6 677 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 OR52A5Q9H2C5 316 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 SRMSQ9H3Y6 488 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 FANCEQ9HB96 536 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 MLXIPLQ9NP71 852 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 PCMTD2Q9NV79 361 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 PCDHA3Q9Y5H8 950 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 SPTAN1Q13813 2472 aaKnown RBP16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 FER1L5A0AVI2 2057 aa16.58■□□□□ 0.25
RPUSD4-207ENST00000532800 SHANK1Q9Y566 2161 aa16.58■□□□□ 0.25
RPUSD4-207ENST00000532800 IGLV3-16A0A075B6K0 115 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 TTLL8A6PVC2 850 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 CFAP99D6REC4 459 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 CAPN1P07384 714 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 GNLYP22749 145 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 CTNNA2P26232 953 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 PRDX3P30048 256 aaKnown RBP16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 PTPN7P35236 360 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 PREPP48147 710 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 GSDMDP57764 484 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 SPA17Q15506 151 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 PTCHD3Q3KNS1 767 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 SYTL1Q8IYJ3 562 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 OR52E1Q8NGJ3 308 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 PSMG3-AS1Q96PY0 264 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 HGH1Q9BTY7 390 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 XKR8Q9H6D3 395 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 ZDHHC3Q9NYG2 299 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 SNX7Q9UNH6 387 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 EFR3BQ9Y2G0 817 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 PCDHGA9Q9Y5G4 932 aaKnown RBP16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 DUSP10Q9Y6W6 482 aa16.58■□□□□ 0.24
RPUSD4-207ENST00000532800 TRBV5-4A0A0C4DH59 114 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 C17orf113A0A1B0GUU1 675 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 MATN2O00339 956 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 STK10O94804 968 aaKnown RBP16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 RAB40ALP0C0E4 278 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 CYP2A7P20853 494 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 ACRV1P26436 265 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 HADHAP40939 763 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 PRKG2Q13237 762 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 SKOR2Q2VWA4 1001 aaPredicted RBP16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 ZRANB3Q5FWF4 1079 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 SERPINA9Q86WD7 417 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 KLHDC8BQ8IXV7 354 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 CCDC170Q8IYT3 715 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 CLDN19Q8N6F1 224 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 CPT1CQ8TCG5 803 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 ALG3Q92685 438 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 TRAPPC9Q96Q05 1148 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 NLNQ9BYT8 704 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 PITPNM3Q9BZ71 974 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 ACTR5Q9H9F9 607 aaPredicted RBP16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 ARNT2Q9HBZ2 717 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 TCFL5Q9UL49 500 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 SEC16AO15027 2179 aa16.57■□□□□ 0.24
RPUSD4-207ENST00000532800 SOWAHDA6NJG2 315 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 IFRD1O00458 451 aaPredicted RBP16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 SORBS2O94875 1100 aaKnown RBP16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 TMEM63AO94886 807 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 TPH1P17752 444 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 CYLC1P35663 651 aaPredicted RBP16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 ITGA1P56199 1179 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 GPR33Q49SQ1 333 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 PAPD7Q5XG87 772 aaKnown RBP16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 SARM1Q6SZW1 724 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 PIANPQ8IYJ0 282 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 ADGRF3Q8IZF5 1079 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 EFCAB3Q8N7B9 438 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 HEXDCQ8WVB3 486 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 TRIM5Q9C035 493 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 TFB2MQ9H5Q4 396 aaKnown RBP16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 PIH1D1Q9NWS0 290 aaKnown RBP16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 ACTR10Q9NZ32 417 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 LUZP4Q9P127 313 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 ICE1Q9Y2F5 2266 aa16.56■□□□□ 0.24
RPUSD4-207ENST00000532800 RP1L1Q8IWN7 2480 aaPredicted RBP16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 SPTBN1Q01082 2364 aaKnown RBP16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 PRRC2CQ9Y520 2896 aaKnown RBP16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 VPS4BO75351 444 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 CEACAM4O75871 244 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 MSL3P1P0C860 447 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 RWDD2BP57060 319 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 BOP1Q14137 746 aaKnown RBP16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 DBN1Q16643 649 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 PRR30Q53SZ7 412 aaPredicted RBP16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 KCTD11Q693B1 232 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 CDHR3Q6ZTQ4 885 aa16.55■□□□□ 0.24
RPUSD4-207ENST00000532800 TAS2R42Q7RTR8 314 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms