RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 HAUS5O94927 633 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 ESR1P03372 595 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 ERVK-10P10266 1014 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 FGF3P11487 239 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 CCL4P13236 92 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 PKMP14618 531 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 ITIH1P19827 911 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 MAPK9P45984 424 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 LEPRP48357 1165 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 EIF3BP55884 814 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 ARL4CP56559 192 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 MPP1Q00013 466 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 TIAL1Q01085 375 aaKnown RBP eCLIP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 CKAP4Q07065 602 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 HSPA14Q0VDF9 509 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 THOC5Q13769 683 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 FRG1Q14331 258 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 GRB7Q14451 532 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 TBC1D25Q3MII6 688 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 PHF19Q5T6S3 580 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 RNF187Q5TA31 235 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 PTRHD1Q6GMV3 140 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 CLEC14AQ86T13 490 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 KCNMB4Q86W47 210 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 LSMEM2Q8N112 164 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 MMGT1Q8N4V1 131 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 NOA1Q8NC60 698 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 C2CD4AQ8NCU7 369 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 BBOF1Q8ND07 529 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 ASZ1Q8WWH4 475 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 ZNF592Q92610 1267 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 ART4Q93070 314 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 TMEM159Q96B96 161 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 C9orf72Q96LT7 481 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 FERD3LQ96RJ6 166 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 SLC30A3Q99726 388 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 TFB2MQ9H5Q4 396 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 MVB12BQ9H7P6 319 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 FBXO6Q9NRD1 293 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 MOCS1Q9NZB8 636 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 GNPTGQ9UJJ9 305 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 FBXO5Q9UKT4 447 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 LOXL2Q9Y4K0 774 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 HEBP2Q9Y5Z4 205 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 COLEC10Q9Y6Z7 277 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 SNRNP200O75643 2136 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 ANKRD11Q6UB99 2663 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 ADAMTS20P59510 1910 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 SRRM3A6NNA2 597 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 CAPN5O15484 640 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 TNFSF15O95150 251 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 C1QAP02745 245 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 ANKRD34CP0C6C1 535 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 AMD1P17707 334 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 NDUFS1P28331 727 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 MLLT3P42568 568 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 CSE1LP55060 971 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 ERVPABLB-1P60509 514 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 SLC7A5Q01650 507 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 PDIA2Q13087 525 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 TUBB2AQ13885 445 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 TEDDM1Q5T9Z0 273 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 CNSTQ6PJW8 725 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 PLXDC1Q8IUK5 500 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 ANKMY2Q8IV38 441 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 OTUD6BQ8N6M0 293 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 ACVR1CQ8NER5 493 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 OR52E1Q8NGJ3 308 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 OR5AR1Q8NGP9 310 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 GIMAP7Q8NHV1 300 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 SNIP1Q8TAD8 396 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 TRIM44Q96DX7 344 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 CERS2Q96G23 380 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 ZNF578Q96N58 590 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 PANX3Q96QZ0 392 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 CMKLR1Q99788 373 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 MENTQ9BUN1 341 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 TUBB2BQ9BVA1 445 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 IARS2Q9NSE4 1012 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 OCIAD1Q9NX40 245 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 SLC17A6Q9P2U8 582 aa13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 ZC3H7BQ9UGR2 993 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 DMGDHQ9UI17 866 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-220ENST00000532375 LAMA5O15230 3695 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 OR5K3A6NET4 321 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 A8MU76 341 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 C9orf172C9J069 976 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 F8W8V4 182 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 AGRPO00253 132 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 IFRD1O00458 451 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 BTN3A3O00478 584 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 TOX3O15405 576 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 AHSGP02765 367 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 ITGA2BP08514 1039 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 CLCN7P51798 805 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 PRKG2Q13237 762 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 ST3GAL2Q16842 350 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 PLEKHS1Q5SXH7 462 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 GALNT7Q86SF2 657 aa13.55□□□□□ -0.24
TSPAN4-220ENST00000532375 RASGRP3Q8IV61 690 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms