RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 TMEM200AQ86VY9 491 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 ATPAF2Q8N5M1 289 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 CATSPER1Q8NEC5 780 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 LPCAT1Q8NF37 534 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 OR1N1Q8NGS0 311 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 SLC30A5Q8TAD4 765 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 NRGNQ92686 78 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 GLYATL1Q969I3 302 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 MCEEQ96PE7 176 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 TMEM121Q9BTD3 319 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 NDC1Q9BTX1 674 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 SNRNP25Q9BV90 132 aaKnown RBP7.96□□□□□ -1.14
CD44-232ENST00000531118 SPATA16Q9BXB7 569 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 SAP130Q9H0E3 1048 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 SYTL2Q9HCH5 934 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 TRIM39Q9HCM9 518 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 BRD7Q9NPI1 651 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 HRASLS2Q9NWW9 162 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 TNFRSF10DQ9UBN6 386 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 SEC14L3Q9UDX4 400 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 NDOR1Q9UHB4 597 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 DMGDHQ9UI17 866 aaKnown RBP7.96□□□□□ -1.14
CD44-232ENST00000531118 TINAGQ9UJW2 476 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 POMT2Q9UKY4 750 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 CDYLQ9Y232 598 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 TCRBV5S1A1TA0A578 114 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 OR6C74A6NCV1 312 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 SLC9B1P1A6NJY1 282 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 KIAA1324LA8MWY0 1029 aaPredicted RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 EIF3CLB5ME19 914 aaKnown RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 F8VZ95 297 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 SOCS6O14544 535 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 DAPK3O43293 454 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 SLC19A2O60779 497 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 SLC25A14O95258 325 aaPredicted RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 HBQ1P09105 142 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 ESRRAP11474 423 aaPredicted RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 MTHFD1P11586 935 aaKnown RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 VCLP18206 1134 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 HLA-DPA1P20036 260 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 CDH3P22223 829 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 MST1P26927 711 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 PREPP48147 710 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 DCDC1P59894 354 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 DPYSQ14117 519 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 C1orf189Q5VU69 101 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 PDPK2PQ6A1A2 396 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 ARMC6Q6NXE6 501 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 DNAJC24Q6P3W2 148 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 ISLR2Q6UXK2 745 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 LINC00696Q6ZRV3 163 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 NCCRP1Q6ZVX7 275 aaPredicted RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 CXXC5Q7LFL8 322 aaKnown RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 PRIMA1Q86XR5 153 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 ZNF677Q86XU0 584 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 TRAPPC5Q8IUR0 188 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 ANKRD20A12PQ8NF67 263 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 SPATA3Q8NHX4 192 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 PROKR1Q8TCW9 393 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 PEBP4Q96S96 227 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 EIF3CQ99613 913 aaKnown RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 CNPY3Q9BT09 278 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 ZSCAN5AQ9BUG6 496 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 NUP85Q9BW27 656 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 LHPPQ9H008 270 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 VPS16Q9H269 839 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 NT5MQ9NPB1 228 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 IMP3Q9NV31 184 aaKnown RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 ABI3Q9P2A4 366 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 IFT80Q9P2H3 777 aaPredicted RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 NFKBIL1Q9UBC1 381 aaPredicted RBP7.95□□□□□ -1.14
CD44-232ENST00000531118 CHKBQ9Y259 395 aa7.95□□□□□ -1.14
CD44-232ENST00000531118 TRAV17A0A0B4J275 112 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 RGSL1A5PLK6 1076 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 ANKRD62A6NC57 917 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 MAFKO60675 156 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 PRLP01236 227 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 CALB1P05937 261 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 BMP4P12644 408 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 FOSL1P15407 271 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 ST6GAL1P15907 406 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 CHRNB2P17787 502 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 IGFBP2P18065 325 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 MMP11P24347 488 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 NSFP46459 744 aaKnown RBP7.94□□□□□ -1.14
CD44-232ENST00000531118 IDH3AP50213 366 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 RPL7AP62424 266 aaKnown RBP7.94□□□□□ -1.14
CD44-232ENST00000531118 ARG2P78540 354 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 CDR2Q01850 454 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 OGDHQ02218 1023 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 DSC2Q02487 901 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 FOLH1Q04609 750 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 DMPKQ09013 629 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 GALNT3Q14435 633 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 IHHQ14623 411 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 TUBB8Q3ZCM7 444 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 PPP6R3Q5H9R7 873 aaPredicted RBP7.94□□□□□ -1.14
CD44-232ENST00000531118 ALG1LQ6GMV1 187 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 RHBDD2Q6NTF9 364 aa7.94□□□□□ -1.14
CD44-232ENST00000531118 FAM83HQ6ZRV2 1179 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms