RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 MED7O43513 233 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 HRO43593 1189 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 SEC22BO75396 215 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 RFPL3O75679 317 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 PDE9AO76083 593 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 RHOBTB1O94844 696 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 FADS2O95864 444 aaKnown RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 TPOP07202 933 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 RETP07949 1114 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 NCK1P16333 377 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 IL1RNP18510 177 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 TNNI1P19237 187 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 GPD1P21695 349 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 CD72P21854 359 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 GADD45AP24522 165 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 RPL9P32969 192 aaKnown RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 SCNN1GP51170 649 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 SOX10P56693 466 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 SCN1BQ07699 218 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 RAPSNQ13702 412 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 DGCR6Q14129 220 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 CAPRIN1Q14444 709 aaKnown RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 GBX1Q14549 363 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 FSCN1Q16658 493 aaKnown RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 COL28A1Q2UY09 1125 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 VPS26BQ4G0F5 336 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 LAIR1Q6GTX8 287 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 FIP1L1Q6UN15 594 aaKnown RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 COMMD7Q86VX2 200 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 ZBTB44Q8NCP5 570 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF680Q8NEM1 530 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 KHSRPQ92945 711 aaKnown RBP eCLIP8□□□□□ -1.132e-7■■■■□ 20
CSDE1-214ENST00000530886 RNF34Q969K3 372 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 PTERQ96BW5 349 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 MCCC1Q96RQ3 725 aaPredicted RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 SEPHS2Q99611 448 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 RAD9AQ99638 391 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 LRRC3Q9BY71 257 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 XYLT2Q9H1B5 865 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 POMKQ9H5K3 350 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 LTB4R2Q9NPC1 389 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 CUEDC1Q9NWM3 386 aaPredicted RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 PCDHB5Q9Y5E4 795 aa8□□□□□ -1.13
CSDE1-214ENST00000530886 MAGED1Q9Y5V3 778 aaPredicted RBP8□□□□□ -1.13
CSDE1-214ENST00000530886 A0A087X1B8 175 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 DDTLA6NHG4 134 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 H0YCG3 227 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 NFIBO00712 420 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CYP7B1O75881 506 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CCNYL3P0C7X3 344 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ZFP36L2P47974 494 aaKnown RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 UBXN2AP68543 259 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 IL1RL1Q01638 556 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CHRNB3Q05901 458 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 RCAN2Q14206 197 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 GRM3Q14832 879 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 KYAT1Q16773 422 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 HEATR6Q6AI08 1181 aaKnown RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CCDC149Q6ZUS6 474 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 MRPL10Q7Z7H8 261 aaKnown RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 FAM124AQ86V42 546 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 RNF130Q86XS8 419 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF557Q8N988 423 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CERKQ8TCT0 537 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 LRRN4Q8WUT4 740 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 HTR3CQ8WXA8 447 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 C19orf60Q96EN9 201 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 TEPSINQ96N21 525 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 AGAP2Q99490 1192 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 LDAHQ9H6V9 325 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 KMT5AQ9NQR1 393 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ACSS2Q9NR19 701 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 DYRK4Q9NR20 520 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 FAM8A1Q9UBU6 413 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ENOPH1Q9UHY7 261 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 FBXO10Q9UK96 956 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ACSL5Q9ULC5 683 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ACOT9Q9Y305 439 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 RNF215Q9Y6U7 377 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 IFNA14P01570 189 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ANXA6P08133 673 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 GGT1P19440 569 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 TNFSF8P32971 234 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 RECQLP46063 649 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 SESN2P58004 480 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 MAB21L1Q13394 359 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 PICALMQ13492 652 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 MAP1SQ66K74 1059 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-214ENST00000530886 HTR3DQ70Z44 454 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 HIPK1Q86Z02 1210 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 TMC8Q8IU68 726 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CNTN4Q8IWV2 1026 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 CCNYL1Q8N7R7 359 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ST8SIA4Q92187 359 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 FOXJ1Q92949 421 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 WBP1Q96G27 269 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ZSWIM3Q96MP5 696 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 MAGIXQ9H6Y5 334 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 MED9Q9NWA0 146 aa7.99□□□□□ -1.13
CSDE1-214ENST00000530886 ERVK13-1Q9NX77 482 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms