RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 CRTAC1Q9NQ79 661 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 PMM2O15305 246 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 BANF1O75531 89 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 PAPSS2O95340 614 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 CBSLP0DN79 551 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 TSPAN8P19075 237 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 GNAZP19086 355 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 CBSP35520 551 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 PIK3CBP42338 1070 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 EIF2B2P49770 351 aaKnown RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 SNAPC1Q16533 368 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 ZIK1Q3SY52 487 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 MFSD5Q6N075 450 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 BRAT1Q6PJG6 821 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 FAM129CQ86XR2 697 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 HID1Q8IV36 788 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 SH3RF2Q8TEC5 729 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 ZNF483Q8TF39 744 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 FAR1Q8WVX9 515 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 KBTBD7Q8WVZ9 684 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 ACOT12Q8WYK0 555 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 TSSK3Q96PN8 268 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 TRNT1Q96Q11 434 aaKnown RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 ZSCAN5AQ9BUG6 496 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 MCOLN1Q9GZU1 580 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 WDR26Q9H7D7 661 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 DZANK1Q9NVP4 752 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 DNAJB4Q9UDY4 337 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 MRPS7Q9Y2R9 242 aaKnown RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 COL22A1Q8NFW1 1626 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 WASHC1A8K0Z3 465 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 WASH3PC4AMC7 463 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 WNT9AO14904 365 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 TRIM3O75382 744 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 ITGBL1O95965 494 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 GPIP06744 558 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 ALOX5P09917 674 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 ADH5P11766 374 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 ZNF823P16415 610 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 CCR8P51685 355 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 RASGEF1BQ0VAM2 473 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 CHIT1Q13231 466 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.33□□□□□ -1.087e-7■■□□□ 12.2
CTNND1-225ENST00000530094 GLYATQ6IB77 296 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 KIAA0930Q6ICG6 404 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 DRICH1Q6PGQ1 229 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 WASH2PQ6VEQ5 465 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 GRASPQ7Z6J2 395 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 CCDC36Q8IYA8 594 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 VANGL1Q8TAA9 524 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 FCRL4Q96PJ5 515 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 NKX2-4Q9H2Z4 354 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 MCCC2Q9HCC0 563 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 SDHAF3Q9NRP4 125 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 FCF1Q9Y324 198 aaKnown RBP8.33□□□□□ -1.08
CTNND1-225ENST00000530094 MYH1P12882 1939 aa8.33□□□□□ -1.08
CTNND1-225ENST00000530094 CASKO14936 926 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 INPPL1O15357 1258 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 LRCH4O75427 683 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 CCNB2O95067 398 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 LCA5LO95447 670 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 VNN1O95497 513 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 IGFBP5P24593 272 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 ASPAP45381 313 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 RPS6KA3P51812 740 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 MED22Q15528 200 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 DLG2Q15700 870 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 GKN2Q86XP6 184 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 ZNF280BQ86YH2 543 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 SPATA6LQ8N4H0 392 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 TRPV1Q8NER1 839 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 SNX33Q8WV41 574 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 GPATCH1Q9BRR8 931 aaKnown RBP8.32□□□□□ -1.08
CTNND1-225ENST00000530094 TBC1D10AQ9BXI6 508 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 GSDMCQ9BYG8 508 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 PLGRKTQ9HBL7 147 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 CNTN3Q9P232 1028 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 UPB1Q9UBR1 384 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 SNX10Q9Y5X0 201 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 MYH3P11055 1940 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 ILVBLA1L0T0 632 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 OR2AG2A6NM03 316 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 TEX46H3BTG2 121 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 PITPNM1O00562 1244 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 PLIN3O60664 434 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 TBX18O95935 607 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 RENP00797 406 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 RB1P06400 928 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 CCR10P46092 362 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 HCAR3P49019 387 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 CLCN7P51798 805 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 HADHBP55084 474 aaKnown RBP8.32□□□□□ -1.08
CTNND1-225ENST00000530094 JAM2P57087 298 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 ECT2LQ008S8 904 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 WDR45BQ5MNZ6 344 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 ADGRD1Q6QNK2 874 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 GPALPP1Q8IXQ4 340 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 COX18Q8N8Q8 333 aa8.32□□□□□ -1.08
CTNND1-225ENST00000530094 C12orf66Q96MD2 445 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms