RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 NACC2Q96BF6 587 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 PTERQ96BW5 349 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 AGAP4Q96P64 663 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 INSM2Q96T92 566 aaPredicted RBP10.11□□□□□ -0.79
COPB1-207ENST00000529866 SLX1AQ9BQ83 275 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 AP1M1Q9BXS5 423 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 PACSIN1Q9BY11 444 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 WWP1Q9H0M0 922 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 SRMSQ9H3Y6 488 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 ZBTB20Q9HC78 741 aaPredicted RBP10.11□□□□□ -0.79
COPB1-207ENST00000529866 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.11□□□□□ -0.79
COPB1-207ENST00000529866 IFNKQ9P0W0 207 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 IFT80Q9P2H3 777 aaPredicted RBP10.11□□□□□ -0.79
COPB1-207ENST00000529866 TMPRSS11EQ9UL52 423 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 CAPN11Q9UMQ6 739 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 CCDC66A2RUB6 948 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 MGAT4DA6NG13 374 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 JRKO75564 520 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 NDST3O95803 873 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 SERPING1P05155 500 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 ST6GAL1P15907 406 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 HTR1EP28566 365 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 AKT1P31749 480 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 HMGCLP35914 325 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 SPAM1P38567 509 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 UBASH3AP57075 661 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 DCDP81605 110 aaKnown RBP10.1□□□□□ -0.79
COPB1-207ENST00000529866 ZBED6P86452 979 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 OTUD4Q01804 1114 aaKnown RBP10.1□□□□□ -0.79
COPB1-207ENST00000529866 GBE1Q04446 702 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 ZBTB17Q13105 803 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 ITGA9Q13797 1035 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 DPYSL3Q14195 570 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 PDK2Q15119 407 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 SLC14A2Q15849 920 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 PRAMEF13Q5VWM6 474 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 RHBDD2Q6NTF9 364 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 TMEM220Q6QAJ8 160 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 RPTNQ6XPR3 784 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 PPP1R32Q7Z5V6 425 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 HOOK3Q86VS8 718 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 ZNF808Q8N4W9 903 aaPredicted RBP10.1□□□□□ -0.79
COPB1-207ENST00000529866 KCTD6Q8NC69 237 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 ACVR1CQ8NER5 493 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 LCN9Q8WX39 176 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 SYN2Q92777 582 aaPredicted RBP10.1□□□□□ -0.79
COPB1-207ENST00000529866 RELTQ969Z4 430 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 IMP4Q96G21 291 aaKnown RBP10.1□□□□□ -0.79
COPB1-207ENST00000529866 PITPNM3Q9BZ71 974 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 TRABDQ9H4I3 376 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 BPIFA1Q9NP55 256 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 IL26Q9NPH9 171 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 TXLNGQ9NUQ3 528 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 CSAG2Q9Y5P2 127 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 TACC2O95359 2948 aa10.1□□□□□ -0.79
COPB1-207ENST00000529866 GLYATL1P3A0A0U1RQE8 302 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 C2orf74A8MZ97 194 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 ZSCAN9O15535 394 aaPredicted RBP10.09□□□□□ -0.79
COPB1-207ENST00000529866 OR2B3O76000 313 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 SNRPB2P08579 225 aaKnown RBP10.09□□□□□ -0.79
COPB1-207ENST00000529866 ATXN8OSP0DMR3 200 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 MSH3P20585 1137 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 PRDX3P30048 256 aaKnown RBP10.09□□□□□ -0.79
COPB1-207ENST00000529866 SSTR2P30874 369 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 PPIDQ08752 370 aaKnown RBP10.09□□□□□ -0.79
COPB1-207ENST00000529866 ZNF630Q2M218 657 aaPredicted RBP10.09□□□□□ -0.79
COPB1-207ENST00000529866 FNBP1LQ5T0N5 605 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 GPRC6AQ5T6X5 926 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 C1orf189Q5VU69 101 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 ALKBH5Q6P6C2 394 aaKnown RBP10.09□□□□□ -0.79
COPB1-207ENST00000529866 IGFL2Q6UWQ7 119 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 FAM151BQ6UXP7 276 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 CDHR3Q6ZTQ4 885 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 PQLC3Q8N755 202 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 CNTD1Q8N815 330 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 SPDYE1Q8NFV5 336 aaPredicted RBP10.09□□□□□ -0.79
COPB1-207ENST00000529866 OR2L2Q8NH16 312 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 ITLN2Q8WWU7 325 aaPredicted RBP10.09□□□□□ -0.79
COPB1-207ENST00000529866 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.09□□□□□ -0.79
COPB1-207ENST00000529866 VPS50Q96JG6 964 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 CCM2Q9BSQ5 444 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 SLC25A51Q9H1U9 297 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 SMOXQ9NWM0 555 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 IRAK4Q9NWZ3 460 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 FBXL4Q9UKA2 621 aa10.09□□□□□ -0.79
COPB1-207ENST00000529866 TRGV8A0A0C4DH27 118 aa10.08□□□□□ -0.8
COPB1-207ENST00000529866 MYO1FO00160 1098 aa10.08□□□□□ -0.8
COPB1-207ENST00000529866 AURKAO14965 403 aa10.08□□□□□ -0.8
COPB1-207ENST00000529866 MT-CYBP00156 380 aaPredicted RBP10.08□□□□□ -0.8
COPB1-207ENST00000529866 CBSLP0DN79 551 aa10.08□□□□□ -0.8
COPB1-207ENST00000529866 MMP11P24347 488 aa10.08□□□□□ -0.8
COPB1-207ENST00000529866 CBSP35520 551 aa10.08□□□□□ -0.8
COPB1-207ENST00000529866 AP1B1Q10567 949 aa10.08□□□□□ -0.8
COPB1-207ENST00000529866 SLC10A2Q12908 348 aaPredicted RBP10.08□□□□□ -0.8
COPB1-207ENST00000529866 PRKD1Q15139 912 aaPredicted RBP10.08□□□□□ -0.8
COPB1-207ENST00000529866 NFKBIBQ15653 356 aa10.08□□□□□ -0.8
COPB1-207ENST00000529866 INAQ16352 499 aa10.08□□□□□ -0.8
COPB1-207ENST00000529866 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.08□□□□□ -0.83e-6■■□□□ 14.3
COPB1-207ENST00000529866 NKAIN1Q4KMZ8 207 aa10.08□□□□□ -0.8
COPB1-207ENST00000529866 SARM1Q6SZW1 724 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms