RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ATG4AQ8WYN0 398 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 RTP4Q96DX8 246 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 VPS35Q96QK1 796 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 APOL2Q9BQE5 337 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 TMEM121Q9BTD3 319 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 FSD1LQ9BXM9 530 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 OR2AG1Q9H205 316 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 ARNT2Q9HBZ2 717 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 LZTFL1Q9NQ48 299 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 ARL5AQ9Y689 179 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 FER1L5A0AVI2 2057 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 A6NCN8 305 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 GPR39O43194 453 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 LIASO43766 372 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 UGT1A9O60656 530 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 MTX2O75431 263 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF189O75820 626 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-212ENST00000528930 STK10O94804 968 aaKnown RBP8.3□□□□□ -1.08
SSBP3-212ENST00000528930 RPLP0P05388 317 aaKnown RBP8.3□□□□□ -1.08
SSBP3-212ENST00000528930 UGT1A6P19224 532 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 UGT1A1P22309 533 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 UGT1A4P22310 534 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 UGT1A3P35503 534 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 SPAM1P38567 509 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 TNNT3P45378 269 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-212ENST00000528930 CLCNKAP51800 687 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 TMEM115Q12893 351 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-212ENST00000528930 PEX6Q13608 980 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 SPARCL1Q14515 664 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 PRPSAP1Q14558 356 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 RPS6KA1Q15418 735 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 SIX1Q15475 284 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-212ENST00000528930 TAF1AQ15573 450 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-212ENST00000528930 CHRNA6Q15825 494 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 NADK2Q4G0N4 442 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 OXLD1Q5BKU9 147 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 ZDHHC20Q5W0Z9 365 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 C11orf96Q7Z7L8 435 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 CCNJLQ8IV13 435 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF547Q8IVP9 402 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 SFRP1Q8N474 314 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 IL22RA1Q8N6P7 574 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 Q8N9G6 341 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-212ENST00000528930 GLIS1Q8NBF1 620 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 OR4K2Q8NGD2 314 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 BRSK1Q8TDC3 778 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 SLC37A2Q8TED4 501 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 GFM1Q96RP9 751 aaKnown RBP8.3□□□□□ -1.08
SSBP3-212ENST00000528930 TBL1YQ9BQ87 522 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 TLR10Q9BXR5 811 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 FRMD8P1Q9BZ68 369 aaPredicted RBP8.3□□□□□ -1.08
SSBP3-212ENST00000528930 UGT1A7Q9HAW7 530 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 UGT1A10Q9HAW8 530 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 UGT1A8Q9HAW9 530 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.3□□□□□ -1.088e-7■■■■□ 22.9
SSBP3-212ENST00000528930 TBC1D29Q9UFV1 150 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 SLC23A2Q9UGH3 650 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 KCND3Q9UK17 655 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 KCNK6Q9Y257 313 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 PPP2R2CQ9Y2T4 447 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 KCTD3Q9Y597 815 aa8.3□□□□□ -1.08
SSBP3-212ENST00000528930 TRBV23OR9-2A0A075B6M9 112 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 GLYATL1P3A0A0U1RQE8 302 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 AGAP14A8MT82 685 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 GPR89AB7ZAQ6 455 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 KIF2AO00139 706 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-212ENST00000528930 STX7O15400 261 aaKnown RBP8.29□□□□□ -1.08
SSBP3-212ENST00000528930 LDB2O43679 373 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 VEGFDO43915 354 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 CDK14O94921 469 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 GPR89BP0CG08 455 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 ACP5P13686 325 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 LPOP22079 712 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-212ENST00000528930 CD1CP29017 333 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 STIP1P31948 543 aaKnown RBP8.29□□□□□ -1.08
SSBP3-212ENST00000528930 FASLGP48023 281 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 MAPK10P53779 464 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 OR1D5P58170 312 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 KRTAP10-9P60411 292 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 XIAPP98170 497 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 ZFP36L1Q07352 338 aaKnown RBP8.29□□□□□ -1.08
SSBP3-212ENST00000528930 P3H1Q32P28 736 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-212ENST00000528930 IYDQ6PHW0 289 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 FAM151BQ6UXP7 276 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 ARHGEF18Q6ZSZ5 1173 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 PRUNE1Q86TP1 453 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 LRRTM4Q86VH4 590 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 PHYKPLQ8IUZ5 450 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 SLITRK4Q8IW52 837 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF295-AS1Q8N0V1 137 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 DDHD1Q8NEL9 900 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 TRIM58Q8NG06 486 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 OR13C4Q8NGS5 318 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF398Q8TD17 642 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 C1orf54Q8WWF1 131 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 PPP1R2P1Q96PQ5 205 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 ALS2CR12Q96Q35 445 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 C19orf43Q9BQ61 176 aa8.29□□□□□ -1.08
SSBP3-212ENST00000528930 GSX1Q9H4S2 264 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms