RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 LLGL1Q15334 1064 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 INSCQ1MX18 579 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 P3H1Q32P28 736 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 AMZ1Q400G9 498 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 BCL7AQ4VC05 210 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 FAM182AQ5T1J6 154 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 PHF19Q5T6S3 580 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 GPRC6AQ5T6X5 926 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 CCDC181Q5TID7 509 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 DENND5AQ6IQ26 1287 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 TMEM71Q6P5X7 295 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 PCSK4Q6UW60 755 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF662Q6ZS27 426 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 PEX26Q7Z412 305 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 ARHGAP22Q7Z5H3 698 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 AGBL5Q8NDL9 886 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 CCDC112Q8NEF3 446 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 BLOC1S5Q8TDH9 187 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 STK35Q8TDR2 534 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF514Q96K75 400 aaPredicted RBP6.93□□□□□ -1.3
ITGB1-218ENST00000528877 LINC00615Q96LM1 132 aaPredicted RBP6.93□□□□□ -1.3
ITGB1-218ENST00000528877 TEFMQ96QE5 360 aaKnown RBP6.93□□□□□ -1.3
ITGB1-218ENST00000528877 CCNL2Q96S94 520 aaPredicted RBP6.93□□□□□ -1.3
ITGB1-218ENST00000528877 SLC38A3Q99624 504 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 DESI2Q9BSY9 194 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 FICDQ9BVA6 458 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 FRMD8P1Q9BZ68 369 aaPredicted RBP6.93□□□□□ -1.3
ITGB1-218ENST00000528877 ARFGAP3Q9NP61 516 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 PRDM8Q9NQV8 689 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 C1GALT1Q9NS00 363 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 KLC4Q9NSK0 619 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 SIDT1Q9NXL6 827 aaKnown RBP6.93□□□□□ -1.3
ITGB1-218ENST00000528877 FOXJ2Q9P0K8 574 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 TMEM9Q9P0T7 183 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 TRIM10Q9UDY6 481 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 SLC23A2Q9UGH3 650 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 AMFRQ9UKV5 643 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 SPTA1P02549 2419 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 UNC13CQ8NB66 2214 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 TRBV5-4A0A0C4DH59 114 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 A0A0U1RQJ8 604 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 C2orf81A6NN90 581 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 ERI2A8K979 691 aaKnown RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 GOLGA6L6A8MZA4 724 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 STMND1H3BQB6 276 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 H7C0S8 307 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 STX7O15400 261 aaKnown RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 ARHGAP6O43182 974 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 GPR39O43194 453 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 MTX2O75431 263 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 CRTAMO95727 393 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 AP2A1O95782 977 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 FTCDO95954 541 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 FGF3P11487 239 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 LPOP22079 712 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 CTSCP53634 463 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 NAP1L1P55209 391 aaKnown RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 XIAPP98170 497 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 GTF2H3Q13889 308 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 PRPSAP1Q14558 356 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 OASLQ15646 514 aaKnown RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 CHRNA6Q15825 494 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 MSMPQ1L6U9 139 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 PARP6Q2NL67 630 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF648Q5T619 568 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 NKAIN2Q5VXU1 208 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 AADACL2Q6P093 401 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 DARS2Q6PI48 645 aaKnown RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 CRTC3Q6UUV7 619 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 FAM151BQ6UXP7 276 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 TMEM26Q6ZUK4 368 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 PRSS42Q7Z5A4 293 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 PLXDC1Q8IUK5 500 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 TRAPPC5Q8IUR0 188 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 SLC25A41Q8N5S1 370 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 RASGEF1AQ8N9B8 481 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 KCT2Q8NC54 265 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 RCBTB1Q8NDN9 531 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 CCDC110Q8TBZ0 833 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 USP7Q93009 1102 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 ULK4Q96C45 1275 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 LRRC45Q96CN5 670 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 NAF1Q96HR8 494 aaKnown RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 TAAR9Q96RI9 348 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 TBL1YQ9BQ87 522 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 ZPBPQ9BS86 351 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 ASPSCR1Q9BZE9 553 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 RAB33BQ9H082 229 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 OSGEPL1Q9H4B0 414 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF768Q9H5H4 540 aaKnown RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 C10orf88Q9H8K7 445 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 LRRC40Q9H9A6 602 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 CPNE5Q9HCH3 593 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 BPIFA1Q9NP55 256 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 SLC40A1Q9NP59 571 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 OGFRQ9NZT2 677 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF624Q9P2J8 865 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 EPHA6Q9UF33 1036 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 PACSIN2Q9UNF0 486 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 R3HDM2Q9Y2K5 976 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms