RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 DCAF10Q5QP82 559 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 C1QL3Q5VWW1 255 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 SARM1Q6SZW1 724 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
CMTM1-211ENST00000528484 PROKR1Q8TCW9 393 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 HEXDCQ8WVB3 486 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 CPLX3Q8WVH0 158 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.21□□□□□ -0.61
CMTM1-211ENST00000528484 MARVELD3Q96A59 401 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 RBM41Q96IZ5 413 aaKnown RBP11.21□□□□□ -0.61
CMTM1-211ENST00000528484 VPS50Q96JG6 964 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 NAP1L5Q96NT1 182 aaPredicted RBP11.21□□□□□ -0.61
CMTM1-211ENST00000528484 OLFM3Q96PB7 478 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 FERMT1Q9BQL6 677 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 AP1M1Q9BXS5 423 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 DEF6Q9H4E7 631 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 ASB8Q9H765 288 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 ATP13A2Q9NQ11 1180 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 CRLS1Q9UJA2 301 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 LUC7L2Q9Y383 392 aaKnown RBP11.21□□□□□ -0.61
CMTM1-211ENST00000528484 ARHGAP10A1A4S6 786 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 GPR39O43194 453 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 OR2B3O76000 313 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 CAPN1P07384 714 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 ST6GAL1P15907 406 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 NFKB1P19838 968 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 PTPN3P26045 913 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 DCDP81605 110 aaKnown RBP11.2□□□□□ -0.62
CMTM1-211ENST00000528484 MPP3Q13368 585 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 TFDP2Q14188 446 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 NR1I3Q14994 352 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 NOMO1Q15155 1222 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 LLGL1Q15334 1064 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 SLC1A5Q15758 541 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 BCL7AQ4VC05 210 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 NPNTQ6UXI9 565 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 CLEC17AQ6ZS10 378 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 CPNE8Q86YQ8 564 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 IPMKQ8NFU5 416 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 ULK4Q96C45 1275 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 LRRC45Q96CN5 670 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 LINC00615Q96LM1 132 aaPredicted RBP11.2□□□□□ -0.62
CMTM1-211ENST00000528484 PPM1MQ96MI6 270 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 GBP5Q96PP8 586 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 VAT1Q99536 393 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 WDR77Q9BQA1 342 aaPredicted RBP11.2□□□□□ -0.62
CMTM1-211ENST00000528484 DDX56Q9NY93 547 aaKnown RBP11.2□□□□□ -0.62
CMTM1-211ENST00000528484 SRPK3Q9UPE1 567 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 ENTPD4Q9Y227 616 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 GTF3C3Q9Y5Q9 886 aa11.2□□□□□ -0.62
CMTM1-211ENST00000528484 POLEQ07864 2286 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 CCDC66A2RUB6 948 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 LRRTM2O43300 516 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 BUD23O43709 281 aaKnown RBP11.19□□□□□ -0.62
CMTM1-211ENST00000528484 SRP72O76094 671 aaKnown RBP11.19□□□□□ -0.62
CMTM1-211ENST00000528484 ITGA3P26006 1051 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 ARHGAP25P42331 645 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 AIMP2Q13155 320 aaKnown RBP11.19□□□□□ -0.62
CMTM1-211ENST00000528484 ZNF789Q5FWF6 425 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 Q6ZS92 163 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 PID1Q7Z2X4 250 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 AMIGO1Q86WK6 493 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 OR2Y1Q8NGV0 311 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 DENND1AQ8TEH3 1009 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 PTERQ96BW5 349 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 RMDN2Q96LZ7 410 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 TRAPPC9Q96Q05 1148 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 NDC1Q9BTX1 674 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 PITPNM3Q9BZ71 974 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 TFB2MQ9H5Q4 396 aaKnown RBP11.19□□□□□ -0.62
CMTM1-211ENST00000528484 EPS8L2Q9H6S3 715 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 ZNF552Q9H707 407 aaPredicted RBP11.19□□□□□ -0.62
CMTM1-211ENST00000528484 MVB12BQ9H7P6 319 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 P4HTMQ9NXG6 502 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 CAPN11Q9UMQ6 739 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 PCDHGA10Q9Y5H3 936 aa11.19□□□□□ -0.62
CMTM1-211ENST00000528484 A0A1B0GUH1 482 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 C17orf113A0A1B0GUU1 675 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 HEATR9A2RTY3 570 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 BTN3A1O00481 513 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 ZSCAN9O15535 394 aaPredicted RBP11.18□□□□□ -0.62
CMTM1-211ENST00000528484 KDM1AO60341 852 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 KLF7O75840 302 aaPredicted RBP11.18□□□□□ -0.62
CMTM1-211ENST00000528484 TNNT1P13805 278 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 EDN3P14138 238 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 ITGALP20701 1170 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 CHRNA4P43681 627 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 CD151P48509 253 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 PRLHRP49683 370 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 RIPPLY3P57055 190 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 PRKD1Q15139 912 aaPredicted RBP11.18□□□□□ -0.62
CMTM1-211ENST00000528484 LRRC38Q5VT99 294 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 C1orf189Q5VU69 101 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 AGAP7PQ5VUJ5 663 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 RHBDD2Q6NTF9 364 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 TLDC1Q6P9B6 456 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 SPESP1Q6UW49 350 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 KDELC1Q6UW63 502 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 CDHR3Q6ZTQ4 885 aa11.18□□□□□ -0.62
CMTM1-211ENST00000528484 DAAM2Q86T65 1068 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms