RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 PLOD1Q02809 727 aaPredicted RBP14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 HSPA14Q0VDF9 509 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 PRKG2Q13237 762 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 RCAN2Q14206 197 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 ACOX1Q15067 660 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 RAB30Q15771 203 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 RARS2Q5T160 578 aaKnown RBP14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 C9orf64Q5T6V5 341 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 FBXL19Q6PCT2 694 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 ARPINQ7Z6K5 226 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 C12orf40Q86WS4 652 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 RASGRP3Q8IV61 690 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 FNDC5Q8NAU1 212 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 PYDC1Q8WXC3 89 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 ELMO1Q92556 727 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 SCAMP4Q969E2 229 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 AP2M1Q96CW1 435 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 SPDL1Q96EA4 605 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 DUS3LQ96G46 650 aaKnown RBP14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 ZNF514Q96K75 400 aaPredicted RBP14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 COQ10AQ96MF6 247 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 ZNF184Q99676 751 aaPredicted RBP14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 CCM2Q9BSQ5 444 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 EBF3Q9H4W6 596 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 DYRK4Q9NR20 520 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 ASIC5Q9NY37 505 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 ABCD2Q9UBJ2 740 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 CD84Q9UIB8 345 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 EIF3LQ9Y262 564 aaKnown RBP14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 LRCH1Q9Y2L9 728 aa14.47□□□□□ -0.09
ECHDC1-220ENST00000528402 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 CCDC154A6NI56 674 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 PRRT4C9JH25 899 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 C1QTNF3-AMACRE9PGA6 284 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 UGDHO60701 494 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 EEDO75530 441 aaKnown RBP14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 BMP1P13497 986 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 ARSAP15289 507 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 XRCC1P18887 633 aaPredicted RBP14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 DPP6P42658 865 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 PRLHRP49683 370 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 POLR2JP52435 117 aaKnown RBP14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 DPTQ07507 201 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 FCHO2Q0JRZ9 810 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 BNIP2Q12982 314 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 SHHQ15465 462 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 GAB4Q2WGN9 574 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 TMEM52BQ4KMG9 183 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 TCEAL5Q5H9L2 206 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 C9orf50Q5SZB4 431 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 PARS2Q7L3T8 475 aaKnown RBP14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 GLB1L3Q8NCI6 653 aaPredicted RBP14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 OR9I1Q8NGQ6 314 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 PIP4K2CQ8TBX8 421 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 GLMNQ92990 594 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 ZUFSPQ96AP4 578 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 FBXL8Q96CD0 374 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 DTD2Q96FN9 168 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 FOPNLQ96NB1 174 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 ACOX2Q99424 681 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 TRIM15Q9C019 465 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 TMEM245Q9H330 911 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 SLC52A3Q9NQ40 469 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 MAP10Q9P2G4 905 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 CDH7Q9ULB5 785 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 SNX6Q9UNH7 406 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 PTGDR2Q9Y5Y4 395 aa14.46□□□□□ -0.09
ECHDC1-220ENST00000528402 C2orf16Q68DN1 1984 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 NPIPB8E9PQR5 432 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 ARNTLO00327 626 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 LIN7AO14910 233 aaPredicted RBP14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 LSM1O15116 133 aaKnown RBP14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 NPC1O15118 1278 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 RPSAP08865 295 aaKnown RBP14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 HSD17B1P14061 328 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 MAP4P27816 1152 aaKnown RBP14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 GNPDA1P46926 289 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 SLC6A12P48065 614 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 SLC6A11P48066 632 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 DIO3P55073 304 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 MS4A2Q01362 244 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 TMEM115Q12893 351 aaPredicted RBP14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 RUNX3Q13761 415 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 NR6A1Q15406 480 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 AP5B1Q2VPB7 878 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 VPS26BQ4G0F5 336 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 LRRC73Q5JTD7 316 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 FAM46CQ5VWP2 391 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 YAF2Q8IY57 180 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 KLHDC8AQ8IYD2 350 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 PLCD3Q8N3E9 789 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 SFRP1Q8N474 314 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 TERB1Q8NA31 727 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 OR2T11Q8NH01 316 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 SKA2Q8WVK7 121 aaPredicted RBP14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 SUSD6Q92537 303 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 USP7Q93009 1102 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 TMEM159Q96B96 161 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 LRRC58Q96CX6 371 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms