RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 EFCAB8A8MWE9 144 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 CDRT15L2A8MXV6 281 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 B4E171 279 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 E5RI56 91 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 NVLO15381 856 aaKnown RBP13.04□□□□□ -0.32
CAPN1-215ENST00000528396 TOX3O15405 576 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-215ENST00000528396 KLK10O43240 276 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 MAP3K7O43318 606 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 PRAMEF10O60809 474 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 USP1O94782 785 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 TTC4O95801 387 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 RPN2P04844 631 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 OGNP20774 298 aaKnown RBP13.04□□□□□ -0.32
CAPN1-215ENST00000528396 FMO4P31512 558 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 ETV5P41161 510 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 TSPAN7P41732 249 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 MAGEA3P43357 314 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 LEPRP48357 1165 aaKnown RBP13.04□□□□□ -0.32
CAPN1-215ENST00000528396 SEPHS1P49903 392 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 ARL4CP56559 192 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 CKAP4Q07065 602 aaKnown RBP13.04□□□□□ -0.32
CAPN1-215ENST00000528396 PRKG2Q13237 762 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 DCAF12Q5T6F0 453 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 C19orf48Q6RUI8 117 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 NAPRTQ6XQN6 538 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 ARHGAP22Q7Z5H3 698 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 BBOF1Q8ND07 529 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 PHC3Q8NDX5 983 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 SPATA4Q8NEY3 305 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 OR4E2Q8NGC2 313 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 ZNF592Q92610 1267 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 ART4Q93070 314 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 TRIM56Q9BRZ2 755 aaKnown RBP13.04□□□□□ -0.32
CAPN1-215ENST00000528396 FAM167BQ9BTA0 163 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 DPH1Q9BZG8 443 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 PPANQ9NQ55 473 aaKnown RBP13.04□□□□□ -0.32
CAPN1-215ENST00000528396 TDRKHQ9Y2W6 561 aaKnown RBP13.04□□□□□ -0.32
CAPN1-215ENST00000528396 ZFYVE26Q68DK2 2539 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 AHCTF1Q8WYP5 2266 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 ITPR1Q14643 2758 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 SLC5A10A0PJK1 596 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 GSAPA4D1B5 854 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 OR5K3A6NET4 321 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 IQCF5A8MTL0 148 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 MATN2O00339 956 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 FANCGO15287 622 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 C9P02748 559 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 ESR1P03372 595 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 ANKRD34CP0C6C1 535 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 FGF3P11487 239 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-215ENST00000528396 CHRM3P20309 590 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 RPS3P23396 243 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN1-215ENST00000528396 ARNTP27540 789 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 CD82P27701 267 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 CCR7P32248 378 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 ARCN1P48444 511 aaKnown RBP13.03□□□□□ -0.32
CAPN1-215ENST00000528396 FOXM1Q08050 763 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 DHX9Q08211 1270 aaKnown RBP13.03□□□□□ -0.32
CAPN1-215ENST00000528396 CALCOCO2Q13137 446 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 HIF1AQ16665 826 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 ZNF658BQ4V348 819 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-215ENST00000528396 CYB5D1Q6P9G0 228 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 TTC23LQ6PF05 361 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 TMEM135Q86UB9 458 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 CILP2Q8IUL8 1156 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 LMNTD2Q8IXW0 634 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 KRT222Q8N1A0 295 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 CFAP61Q8NHU2 1237 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 UBXN4Q92575 508 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 LPGAT1Q92604 370 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 SIGLEC10Q96LC7 697 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 FCRL3Q96P31 734 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-215ENST00000528396 TEFMQ96QE5 360 aaKnown RBP13.03□□□□□ -0.32
CAPN1-215ENST00000528396 CD180Q99467 661 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 EBNA1BP2Q99848 306 aaKnown RBP13.03□□□□□ -0.32
CAPN1-215ENST00000528396 RAB33BQ9H082 229 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 P2RY12Q9H244 342 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 INTS10Q9NVR2 710 aaKnown RBP13.03□□□□□ -0.32
CAPN1-215ENST00000528396 OCIAD1Q9NX40 245 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 IL1RAPL1Q9NZN1 696 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 EPHA6Q9UF33 1036 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 POLG2Q9UHN1 485 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 CRYL1Q9Y2S2 319 aa13.03□□□□□ -0.32
CAPN1-215ENST00000528396 FAM187AA6NFU0 413 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 POLR1CO15160 346 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-215ENST00000528396 KIF1CO43896 1103 aaKnown RBP13.02□□□□□ -0.33
CAPN1-215ENST00000528396 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-215ENST00000528396 SEC31AO94979 1220 aaKnown RBP13.02□□□□□ -0.33
CAPN1-215ENST00000528396 POLR2CP19387 275 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-215ENST00000528396 AOAHP28039 575 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 ITGA8P53708 1063 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 C2orf54Q08AI8 447 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 CRYMQ14894 314 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 TYSND1Q2T9J0 566 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 SPANXN3Q5MJ09 141 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 XKR5Q6UX68 686 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 CEACAM20Q6UY09 585 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 PRSS42Q7Z5A4 293 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 KCNMB4Q86W47 210 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 AMIGO1Q86WK6 493 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms