RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 SNRPB2P08579 225 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 SNRPAP09012 282 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 HOXC4P09017 264 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ALPIP09923 528 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D3HP0C7X1 549 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ERVK-10P10266 1014 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ZNF20P17024 532 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ZNF7P17097 686 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 BPIP17213 487 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CTPS1P17812 591 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 GABRG2P18507 467 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 AOC1P19801 751 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CD72P21854 359 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CD9P21926 228 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 RPS3P23396 243 aaKnown RBP eCLIP3.78□□□□□ -1.86e-6■■■□□ 17.9
C11orf54-204ENST00000527003 FPR2P25090 351 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 NMBRP28336 390 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CRABP2P29373 138 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CD6P30203 668 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 MC4RP32245 332 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 DRD3P35462 400 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 SKIV2L2P42285 1042 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 DPP6P42658 865 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 WASP42768 502 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 NSG1P42857 185 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 LEPRP48357 1165 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CD151P48509 253 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TPMTP51580 245 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CCR5P51681 352 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ADPRHP54922 357 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CRADDP78560 199 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 PLOD1Q02809 727 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ZNF844Q08AG5 666 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 RALGDSQ12967 914 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 NFATC2Q13469 925 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 OLIG2Q13516 323 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ITIH4Q14624 930 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ACOX1Q15067 660 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 UAP1Q16222 522 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 FXNQ16595 210 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TYSND1Q2T9J0 566 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 KRT71Q3SY84 523 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 KBTBD12Q3ZCT8 623 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 USP39Q53GS9 565 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 SETMARQ53H47 684 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 HSP90AA5PQ58FG0 334 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 LDLRAP1Q5SW96 308 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CEP85LQ5SZL2 805 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TEDDM1Q5T9Z0 273 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 AGBL2Q5U5Z8 902 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D3GQ6DHY5 549 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D3CQ6IPX1 549 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 UGT3A1Q6NUS8 523 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ESRP1Q6NXG1 681 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 KIAA1324Q6UXG2 1013 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 PACS1Q6VY07 963 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 SLC36A4Q6YBV0 504 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TIFABQ6ZNK6 161 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 MARK2Q7KZI7 788 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 PARS2Q7L3T8 475 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 BMP8AQ7Z5Y6 402 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TECPR1Q7Z6L1 1165 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 STRA8Q7Z7C7 330 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 RASSF3Q86WH2 238 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TRIM69Q86WT6 500 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 HORMAD1Q86X24 394 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CTAGE3PQ8IX95 158 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D3Q8IZP1 549 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 RBFAQ8N0V3 343 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 AADATQ8N5Z0 425 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TRAM1L1Q8N609 369 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 OTUD6BQ8N6M0 293 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 PPM1NQ8N819 430 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ZNF366Q8N895 744 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 DENND6BQ8NEG7 585 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CADM4Q8NFZ8 388 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 OR14C36Q8NHC7 312 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ZNF398Q8TD17 642 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ACMSDQ8TDX5 336 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 HMGB4Q8WW32 186 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 SLC44A1Q8WWI5 657 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 ARRDC3Q96B67 414 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 AP2M1Q96CW1 435 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 NUS1Q96E22 293 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 DTD2Q96FN9 168 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 PGM2Q96G03 612 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 DCUN1D1Q96GG9 259 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 VPS39Q96JC1 886 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 DNAJC1Q96KC8 554 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CABS1Q96KC9 395 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBATAQ96M53 351 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 COQ10AQ96MF6 247 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 NSMCE3Q96MG7 304 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 LENG8Q96PV6 779 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 VPS35Q96QK1 796 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 PAFAH2Q99487 392 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 WDR83Q9BRX9 315 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 DHRS4Q9BTZ2 278 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TSSK1BQ9BXA7 367 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 SPATA16Q9BXB7 569 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms