RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ZCWPW2A0A1B0GU75 182 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 CCDC78A2IDD5 438 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 TMEM202A6NGA9 273 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 STK17BO94768 372 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 DLGAP3O95886 979 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 PCCBP05166 539 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 NFKBIAP25963 317 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 ALDH4A1P30038 563 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 ARCN1P48444 511 aaKnown RBP10.71□□□□□ -0.69
NEDD8-204ENST00000526430 LMAN1P49257 510 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 PGDP52209 483 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 TMPRSS15P98073 1019 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 MC2RQ01718 297 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 DHX9Q08211 1270 aaKnown RBP10.71□□□□□ -0.69
NEDD8-204ENST00000526430 SEMA3AQ14563 771 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 MDC1Q14676 2089 aaKnown RBP10.71□□□□□ -0.69
NEDD8-204ENST00000526430 ZXDCQ2QGD7 858 aaPredicted RBP10.71□□□□□ -0.69
NEDD8-204ENST00000526430 ATP13A5Q4VNC0 1218 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 GLE1Q53GS7 698 aaKnown RBP10.71□□□□□ -0.69
NEDD8-204ENST00000526430 ZRANB3Q5FWF4 1079 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 ZNF648Q5T619 568 aaPredicted RBP10.71□□□□□ -0.69
NEDD8-204ENST00000526430 CEACAM20Q6UY09 585 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 ADAMTSL4Q6UY14 1074 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 PCGF5Q86SE9 256 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 TMEM135Q86UB9 458 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 FAM129CQ86XR2 697 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 MCEMP1Q8IX19 187 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 ESX1Q8N693 406 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 DNAAF3Q8N9W5 541 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 FBXO25Q8TCJ0 367 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 STYXQ8WUJ0 223 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 MFSD3Q96ES6 412 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 SCARF2Q96GP6 870 aaPredicted RBP10.71□□□□□ -0.69
NEDD8-204ENST00000526430 PLEKHG4BQ96PX9 1271 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 IL22Q9GZX6 179 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 DPEP2Q9H4A9 486 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 RUBCNLQ9H714 662 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 XAB2Q9HCS7 855 aaKnown RBP10.71□□□□□ -0.69
NEDD8-204ENST00000526430 RRAGDQ9NQL2 400 aaPredicted RBP10.71□□□□□ -0.69
NEDD8-204ENST00000526430 FBXO8Q9NRD0 319 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 PKD2L2Q9NZM6 624 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 BFARQ9NZS9 450 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 PDP2Q9P2J9 529 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 ANAPC5Q9UJX4 755 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 SOX13Q9UN79 622 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 ST14Q9Y5Y6 855 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 TEX264Q9Y6I9 313 aa10.71□□□□□ -0.69
NEDD8-204ENST00000526430 TRBV5-4A0A0C4DH59 114 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 ARHGAP10A1A4S6 786 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 CCDC162PA2VCL2 907 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 OR51F1A6NGY5 319 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 SDR42E2A6NKP2 422 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 C2orf81A6NN90 581 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 RHPN2P1A8MT19 583 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 STX7O15400 261 aaKnown RBP10.7□□□□□ -0.7
NEDD8-204ENST00000526430 SGTAO43765 313 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 CRTAMO95727 393 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 SLC4A1P02730 911 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 C1QAP02745 245 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 CEACAM5P06731 702 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 FURINP09958 794 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 FOXN2P32314 431 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 CSF2RBP32927 897 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 POLD2P49005 469 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 CDK3Q00526 305 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 GUCY2DQ02846 1103 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 FASTKD3Q14CZ7 662 aaKnown RBP10.7□□□□□ -0.7
NEDD8-204ENST00000526430 PRR30Q53SZ7 412 aaPredicted RBP10.7□□□□□ -0.7
NEDD8-204ENST00000526430 ALS2CLQ60I27 953 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 C8orf74Q6P047 294 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 FAM151BQ6UXP7 276 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 PIANPQ8IYJ0 282 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 TRAM1L1Q8N609 369 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 ZNF398Q8TD17 642 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 HDAC10Q969S8 669 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 SGSM3Q96HU1 749 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 FRMD8Q9BZ67 464 aaPredicted RBP10.7□□□□□ -0.7
NEDD8-204ENST00000526430 FAM96AQ9H5X1 160 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 MRM3Q9HC36 420 aaKnown RBP10.7□□□□□ -0.7
NEDD8-204ENST00000526430 KCTD5Q9NXV2 234 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 MRPS18BQ9Y676 258 aaKnown RBP10.7□□□□□ -0.7
NEDD8-204ENST00000526430 RPS6KL1Q9Y6S9 549 aa10.7□□□□□ -0.7
NEDD8-204ENST00000526430 GLYATL1P3A0A0U1RQE8 302 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 A0A1B0GTL3 188 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 FAM237BA0A1B0GVD1 139 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 SMAPO00193 183 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 TNFRSF10CO14798 259 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 INPP4BO15327 924 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 SRP72O76094 671 aaKnown RBP10.69□□□□□ -0.7
NEDD8-204ENST00000526430 CBX6O95503 412 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 F8A1P23610 371 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 SPAM1P38567 509 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 GPR1P46091 355 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 CARSP49589 748 aaKnown RBP10.69□□□□□ -0.7
NEDD8-204ENST00000526430 PLTPP55058 493 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 MAZP56270 477 aaKnown RBP10.69□□□□□ -0.7
NEDD8-204ENST00000526430 KIAA1024LP59773 190 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 ERV3-1Q14264 604 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 ANKRD20A4Q4UJ75 823 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 HP1BP3Q5SSJ5 553 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms