RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PEX13Q92968 403 aa12.5□□□□□ -0.41
TRAPPC4-205ENST00000525079 PDLIM2Q96JY6 352 aa12.5□□□□□ -0.41
TRAPPC4-205ENST00000525079 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-205ENST00000525079 KIFC1Q9BW19 673 aa12.5□□□□□ -0.41
TRAPPC4-205ENST00000525079 SRMSQ9H3Y6 488 aa12.5□□□□□ -0.41
TRAPPC4-205ENST00000525079 PILRAQ9UKJ1 303 aa12.5□□□□□ -0.41
TRAPPC4-205ENST00000525079 PYCARDQ9ULZ3 195 aa12.5□□□□□ -0.41
TRAPPC4-205ENST00000525079 NEU2Q9Y3R4 380 aa12.5□□□□□ -0.41
TRAPPC4-205ENST00000525079 PIKFYVEQ9Y2I7 2098 aa12.5□□□□□ -0.41
TRAPPC4-205ENST00000525079 IGSF10Q6WRI0 2623 aa12.5□□□□□ -0.41
TRAPPC4-205ENST00000525079 SLC5A10A0PJK1 596 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 GSAPA4D1B5 854 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 EIF4E1BA6NMX2 242 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 BHMG1C9JSJ3 638 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 BTN3A3O00478 584 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 ATXN7O15265 892 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 PHF2O75151 1096 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 GSTM1P09488 218 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 EBLN1P0CF75 366 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 LIFP15018 202 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 CCR7P32248 378 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 PPARGP37231 505 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 CD151P48509 253 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 ARL4DP49703 201 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 GNG11P61952 73 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 SARNPP82979 210 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 CDK16Q00536 496 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 RHDQ02161 417 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 GSTM4Q03013 218 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 TAF1BQ53T94 588 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 CASC4Q6P4E1 433 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 RASGRP3Q8IV61 690 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 UNC5BQ8IZJ1 945 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 NLGN4XQ8N0W4 816 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 NLGN4YQ8NFZ3 816 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 SNRNP27Q8WVK2 155 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 SLC39A7Q92504 469 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 UBXN4Q92575 508 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 SGSM3Q96HU1 749 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 SLC41A2Q96JW4 573 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 ZPBPQ9BS86 351 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 ULBP3Q9BZM4 244 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 MVB12BQ9H7P6 319 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 SOX13Q9UN79 622 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 ASF1AQ9Y294 204 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 TDRKHQ9Y2W6 561 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 PCDHGA4Q9Y5G9 962 aa12.49□□□□□ -0.41
TRAPPC4-205ENST00000525079 LOC101059948A0A1B0GTJ6 334 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 TLCD2A6NGC4 264 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 BTN3A1O00481 513 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 NDUFS3O75489 264 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 SPAG6O75602 509 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 KIAA0754O94854 1291 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 ARNTP27540 789 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 ACADLP28330 430 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 MAGEA6P43360 314 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 TTPAP49638 278 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 HSPA14Q0VDF9 509 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 ABRQ12979 859 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 PRKAA1Q13131 559 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 TUBB3Q13509 450 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 AARS2Q5JTZ9 985 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 PTRHD1Q6GMV3 140 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 AMIGO1Q86WK6 493 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 VRK3Q8IV63 474 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 GALNT6Q8NCL4 622 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 CFAP61Q8NHU2 1237 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 TTC9Q92623 222 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 CAPZA3Q96KX2 299 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 CD180Q99467 661 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 CARD6Q9BX69 1037 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 KLHL25Q9H0H3 589 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 DDX47Q9H0S4 455 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 TFB2MQ9H5Q4 396 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 MRM3Q9HC36 420 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 IL1RAPL1Q9NZN1 696 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 SEMA5BQ9P283 1151 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 PLAGL1Q9UM63 463 aa12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 TMEM184BQ9Y519 407 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-205ENST00000525079 GOLGA6L10A0A0M3HER8 536 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 SLC9B1P1A6NJY1 282 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 F8W8V4 182 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 ERVH48-1M5A8F1 160 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 CES2O00748 559 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 PRMT5O14744 637 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 TIAF1O95411 115 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 DLGAP3O95886 979 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 F7P08709 466 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 TPBGLP0DKB5 382 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 FGF5P12034 268 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 CDH3P22223 829 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 MAP4P27816 1152 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 PRDX3P30048 256 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 EIF3BP55884 814 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 HSD11B2P80365 405 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 LY6DQ14210 128 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 IL11RAQ14626 422 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 PPP1R7Q15435 360 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 GPR19Q15760 415 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 PPP1R3BQ86XI6 285 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms