RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 KCNJ1P48048 391 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 KPNA2P52292 529 aaKnown RBP18.05■□□□□ 0.48
CAPN1-203ENST00000525013 SESN2P58004 480 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-203ENST00000525013 PRAMEP78395 509 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 BASP1P80723 227 aaKnown RBP18.05■□□□□ 0.48
CAPN1-203ENST00000525013 ACY1Q03154 408 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 PRKG2Q13237 762 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 ZNF658BQ4V348 819 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-203ENST00000525013 TMTC4Q5T4D3 741 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 LYPLAL1Q5VWZ2 237 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 DRICH1Q6PGQ1 229 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-203ENST00000525013 BORAQ6PGQ7 559 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 FBXO38Q6PIJ6 1188 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 PACS1Q6VY07 963 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 PPHLN1Q8NEY8 458 aaKnown RBP18.05■□□□□ 0.48
CAPN1-203ENST00000525013 OR4L1Q8NH43 312 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 PPM1MQ96MI6 270 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 HGH1Q9BTY7 390 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 FGF21Q9NSA1 209 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 SOHLH2Q9NX45 425 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 RIMKLBQ9ULI2 386 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 TCAF1Q9Y4C2 921 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 LIN7AO14910 233 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-203ENST00000525013 OR1I1O60431 355 aa18.04■□□□□ 0.48
CAPN1-203ENST00000525013 OR56A5P0C7T3 313 aa18.04■□□□□ 0.48
CAPN1-203ENST00000525013 CDH3P22223 829 aa18.04■□□□□ 0.48
CAPN1-203ENST00000525013 BOP1Q14137 746 aaKnown RBP18.04■□□□□ 0.48
CAPN1-203ENST00000525013 SYTL3Q4VX76 610 aa18.04■□□□□ 0.48
CAPN1-203ENST00000525013 FASTKD1Q53R41 847 aaKnown RBP18.04■□□□□ 0.48
CAPN1-203ENST00000525013 PWWP2BQ6NUJ5 590 aa18.04■□□□□ 0.48
CAPN1-203ENST00000525013 C16orf46Q6P387 395 aa18.04■□□□□ 0.48
CAPN1-203ENST00000525013 C4orf22Q6V702 233 aa18.04■□□□□ 0.48
CAPN1-203ENST00000525013 OR52E1Q8NGJ3 308 aa18.04■□□□□ 0.48
CAPN1-203ENST00000525013 STARD8Q92502 1023 aa18.04■□□□□ 0.48
CAPN1-203ENST00000525013 CROTQ9UKG9 612 aa18.04■□□□□ 0.48
CAPN1-203ENST00000525013 SLC9B1P1A6NJY1 282 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 B8ZZF3 427 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 F8W8V4 182 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 MATN2O00339 956 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 KATNA1O75449 491 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 TIAF1O95411 115 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 MT-ND3P03897 115 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 SFTPCP11686 197 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 PLA2G2AP14555 144 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 ITGB6P18564 788 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 TCN2P20062 427 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 PPARGP37231 505 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-203ENST00000525013 CRADDP78560 199 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 MC1RQ01726 317 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 ACVR1Q04771 509 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 CDC20Q12834 499 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 NFATC3Q12968 1075 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 GPR19Q15760 415 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 NAPRTQ6XQN6 538 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 BPHLQ86WA6 291 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-203ENST00000525013 D2HGDHQ8N465 521 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 CATSPER2Q96P56 530 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 NRTNQ99748 197 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 TFB2MQ9H5Q4 396 aaKnown RBP18.03■□□□□ 0.48
CAPN1-203ENST00000525013 XKR8Q9H6D3 395 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 EIF2B3Q9NR50 452 aaKnown RBP18.03■□□□□ 0.48
CAPN1-203ENST00000525013 CHRAC1Q9NRG0 131 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 HOMER3Q9NSC5 361 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 ANAPC5Q9UJX4 755 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 POMT2Q9UKY4 750 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 PADI1Q9ULC6 663 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 ASF1AQ9Y294 204 aa18.03■□□□□ 0.48
CAPN1-203ENST00000525013 MRPS18BQ9Y676 258 aaKnown RBP18.03■□□□□ 0.48
CAPN1-203ENST00000525013 BTN3A3O00478 584 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 BTN3A1O00481 513 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 NTRK1P04629 796 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 F8A1P23610 371 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 CCR10P46092 362 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 CSE1LP55060 971 aaKnown RBP18.02■□□□□ 0.48
CAPN1-203ENST00000525013 TUBB4BP68371 445 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 TUBB2AQ13885 445 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 PCID2Q5JVF3 399 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 ZNF534Q76KX8 674 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 AMIGO1Q86WK6 493 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 CARFQ8N187 725 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 OR5AR1Q8NGP9 310 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 FCRL4Q96PJ5 515 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 TUBB2BQ9BVA1 445 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 FAM117AQ9C073 453 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 C1GALT1Q9NS00 363 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 BFARQ9NZS9 450 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 PCDHB3Q9Y5E6 796 aa18.02■□□□□ 0.48
CAPN1-203ENST00000525013 SNRNP200O75643 2136 aaKnown RBP18.02■□□□□ 0.47
CAPN1-203ENST00000525013 GOLGA6L3A6NEY3 463 aa18.01■□□□□ 0.47
CAPN1-203ENST00000525013 MAP3K7O43318 606 aa18.01■□□□□ 0.47
CAPN1-203ENST00000525013 PRDX3P30048 256 aaKnown RBP18.01■□□□□ 0.47
CAPN1-203ENST00000525013 TERF1P54274 439 aa18.01■□□□□ 0.47
CAPN1-203ENST00000525013 PLOD1Q02809 727 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-203ENST00000525013 SEMA3AQ14563 771 aa18.01■□□□□ 0.47
CAPN1-203ENST00000525013 TRIP13Q15645 432 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-203ENST00000525013 KCTD19Q17RG1 926 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-203ENST00000525013 DEFB109BQ30KR1 87 aa18.01■□□□□ 0.47
CAPN1-203ENST00000525013 AARS2Q5JTZ9 985 aaKnown RBP18.01■□□□□ 0.47
CAPN1-203ENST00000525013 LDB1Q86U70 411 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-203ENST00000525013 TMEM126BQ8IUX1 230 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms