RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ING2Q9H160 280 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 TUFT1Q9NNX1 390 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 FZD3Q9NPG1 666 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 C5AR2Q9P296 337 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 NTNG1Q9Y2I2 539 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 CHST2Q9Y4C5 530 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 NOX1Q9Y5S8 564 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 MGAM2Q2M2H8 2515 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 AKAP6Q13023 2319 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.9□□□□□ -1.32e-8■■■■□ 21.7
NEDD8-203ENST00000524927 CCDC196A0A1B0GTZ2 297 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 FAM234BA2RU67 622 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 AHRRA9YTQ3 701 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 E7ENX8 843 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 F5H697 171 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 OGTO15294 1046 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 CCP110O43303 1012 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 RASAL1O95294 804 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 HOXD9P28356 352 aaPredicted RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 PTDSS1P48651 473 aaKnown RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 ANXA11P50995 505 aaKnown RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 ZNF134P52741 427 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 CACNA2D1P54289 1103 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 CSNK1G2P78368 415 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 TAP2Q03519 686 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 Q0VFX4 171 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 PDE1CQ14123 709 aaPredicted RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 PRKD1Q15139 912 aaPredicted RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 ELOCQ15369 112 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 EDRF1Q3B7T1 1238 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 CD300EQ496F6 205 aaPredicted RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 MPPE1Q53F39 396 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 PDLIM3Q53GG5 364 aaPredicted RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 RABL3Q5HYI8 236 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 CERCAMQ5T4B2 595 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 FAM46CQ5VWP2 391 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 BHLHB9Q6PI77 547 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 CEACAM20Q6UY09 585 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 NEK8Q86SG6 692 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 FAM217AQ8IXS0 508 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 TMEM132CQ8N3T6 1108 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 MYCT1Q8N699 235 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 BMPERQ8N8U9 685 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 WFDC11Q8NEX6 87 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 MYRIPQ8NFW9 859 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 SCAMP5Q8TAC9 235 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 NRGNQ92686 78 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 TRIM63Q969Q1 353 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 C18orf8Q96DM3 657 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 AGAP3Q96P47 875 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 NTPCRQ9BSD7 190 aaKnown RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 SCAND2PQ9GZW5 306 aaPredicted RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 ILKAPQ9H0C8 392 aaPredicted RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 RDH14Q9HBH5 336 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 POLD4Q9HCU8 107 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 TLR8Q9NR97 1041 aaKnown RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 TMEM30AQ9NV96 361 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 VPS54Q9P1Q0 977 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 KCNE5Q9UJ90 142 aa6.9□□□□□ -1.3
NEDD8-203ENST00000524927 CPSF3Q9UKF6 684 aaKnown RBP6.9□□□□□ -1.3
NEDD8-203ENST00000524927 GOLGA6L3A6NEY3 463 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 RNASET2O00584 256 aaKnown RBP6.89□□□□□ -1.31
NEDD8-203ENST00000524927 RGS10O43665 173 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 PIP5K1CO60331 668 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 CCNT1O60563 726 aaKnown RBP6.89□□□□□ -1.31
NEDD8-203ENST00000524927 FAM20BO75063 409 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 TACC1O75410 805 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 CRLF1O75462 422 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 FSHBP01225 129 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 IFNA2P01563 188 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 CSTBP04080 98 aaKnown RBP6.89□□□□□ -1.31
NEDD8-203ENST00000524927 ELANEP08246 267 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 ALPIP09923 528 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 TYRP1P17643 537 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 LMO2P25791 158 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 CDC25AP30304 524 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 HNRNPH3P31942 346 aaKnown RBP6.89□□□□□ -1.31
NEDD8-203ENST00000524927 PBX1P40424 430 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 SELENOPP49908 381 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 LIMK2P53671 638 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 PRKAG1P54619 331 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 TAS2R38P59533 333 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 AKAP17AQ02040 695 aaKnown RBP6.89□□□□□ -1.31
NEDD8-203ENST00000524927 CNTN1Q12860 1018 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 DYRK1AQ13627 763 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 SOWAHAQ2M3V2 549 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 C4orf46Q504U0 113 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 PLAG1Q6DJT9 500 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 DUS1LQ6P1R4 473 aaKnown RBP6.89□□□□□ -1.31
NEDD8-203ENST00000524927 MEX3BQ6ZN04 569 aaKnown RBP6.89□□□□□ -1.31
NEDD8-203ENST00000524927 SLC47A2Q86VL8 602 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 BLIDQ8IZY5 108 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 STK40Q8N2I9 435 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 LRRC52Q8N7C0 313 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 KLK6Q92876 244 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 TMEM125Q96AQ2 219 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 NUDT9Q9BW91 350 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 IL25Q9H293 177 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 TCEAL2Q9H3H9 227 aaPredicted RBP6.89□□□□□ -1.31
NEDD8-203ENST00000524927 C17orf75Q9HAS0 396 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms