RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	TMEM206	Q9H813	350 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	BRF2	Q9HAW0	419 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	PRDM8	Q9NQV8	689 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	SNX15	Q9NRS6	342 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	MYO1A	Q9UBC5	1043 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	DNAI1	Q9UI46	699 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	SCOC	Q9UIL1	159 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	TENM1	Q9UKZ4	2725 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	SCN1A	P35498	2009 aa		5.11	□□□□□ -1.59
PABPC1-223	ENST00000523636	SMIM28	A0A1B0GU29	152 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636		A0A1W2PR48	441 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	HMX3	A6NHT5	357 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	PTGES3L	E9PB15	166 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636		M0QZQ0	153 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	LEFTY2	O00292	366 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	PGRMC2	O15173	223 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	DUX1	O43812	170 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	ATP8B3	O60423	1300 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	JAK2	O60674	1132 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	DAB1	O75553	588 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	PLEKHA8P1	O95397	391 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	YEATS4	O95619	227 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	GP1BA	P07359	652 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	ITGA5	P08648	1049 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	RHOXF2B	P0C7M4	288 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	KLK2	P20151	261 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	TBXAS1	P24557	533 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	PSMA4	P25789	261 aa	Known RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	OXTR	P30559	389 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	CSTF2	P33240	577 aa	Known RBP eCLIP	5.1	□□□□□ -1.59	3e-7	■□□□□ 8.4
PABPC1-223	ENST00000523636	PTGER4	P35408	488 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	UGT1A5	P35504	534 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	GP5	P40197	560 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	ETV5	P41161	510 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	KCNC1	P48547	511 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	GSC	P56915	257 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	GSDMD	P57764	484 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	NXPH1	P58417	271 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	CDK17	Q00537	523 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	FMO1	Q01740	532 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	GALNT2	Q10471	571 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	RPA4	Q13156	261 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	MAMLD1	Q13495	774 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	ENPP2	Q13822	863 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	NFYC	Q13952	458 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	PCOLCE	Q15113	449 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	CLPP	Q16740	277 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	C15orf59	Q2T9L4	293 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	SMU1	Q2TAY7	513 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	XKR4	Q5GH76	650 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	LY6G5C	Q5SRR4	150 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	AGBL4	Q5VU57	503 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	SDHAF4	Q5VUM1	108 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	METTL11B	Q5VVY1	283 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	PM20D1	Q6GTS8	502 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	TRAT1	Q6PIZ9	186 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	SLC30A9	Q6PML9	568 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	SARM1	Q6SZW1	724 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	FAM180A	Q6UWF9	173 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	BBS12	Q6ZW61	710 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.1	□□□□□ -1.59	1e-77	■□□□□ 9
PABPC1-223	ENST00000523636	ADGRG6	Q86SQ4	1221 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	TMPRSS6	Q8IU80	811 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	LRRC56	Q8IYG6	542 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	OR4C6	Q8NH72	309 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	C18orf25	Q96B23	403 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	KTI12	Q96EK9	354 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	NEIL1	Q96FI4	390 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	PGAP3	Q96FM1	320 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	SLITRK1	Q96PX8	696 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	GCNA	Q96QF7	691 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	SEPT5	Q99719	369 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	RHOXF2	Q9BQY4	288 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	STMN4	Q9H169	189 aa	Predicted RBP	5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	OR10A2	Q9H208	303 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	OPA3	Q9H6K4	179 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	MSL2	Q9HCI7	577 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	NRIP3	Q9NQ35	241 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	MAGEL2	Q9UJ55	1249 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	GDA	Q9Y2T3	454 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	PSAT1	Q9Y617	370 aa		5.1	□□□□□ -1.59
PABPC1-223	ENST00000523636	WNK1	Q9H4A3	2382 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	TCHH	Q07283	1943 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	STK36	Q9NRP7	1315 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636		A0A088AWK7	358 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	CCDC187	A0A096LP49	1063 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	PRAMEF33	A0A0G2JMD5	474 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	KLF18	A0A0U1RQI7	1052 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	ERICH2	A1L162	156 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	CCDC78	A2IDD5	438 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636		A4D1N5	150 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	CTAGE15	A4D2H0	777 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	C16orf96	A6NNT2	1141 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	GPR89A	B7ZAQ6	455 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	PRSS44	E7EML9	344 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636		H0YHG0	523 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636		L7N2F9	121 aa		5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	NVL	O15381	856 aa	Known RBP	5.09	□□□□□ -1.59
PABPC1-223	ENST00000523636	YKT6	O15498	198 aa		5.09	□□□□□ -1.59

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