RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 MTRRQ9UBK8 725 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 DKK3Q9UBP4 350 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 UBA2Q9UBT2 640 aaPredicted RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 ZNF639Q9UID6 485 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PTBP2Q9UKA9 531 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 PCTPQ9UKL6 214 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 KCTD3Q9Y597 815 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PCDHA9Q9Y5H5 950 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 GPR45Q9Y5Y3 372 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TET1Q8NFU7 2136 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ZFC3H1O60293 1989 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 PLXNB3Q9ULL4 1909 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 A0A0J9YYE9 177 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 A0A1W2PP18 115 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 TCRBV5S2A0A599 114 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 KANSL1LA0AUZ9 987 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 C7orf72A4D263 438 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ZNF840PA6NDX5 716 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 OR51F1A6NGY5 319 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 EIF4E1BA6NMX2 242 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 C2orf81A6NN90 581 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 NPIPB6E9PJ23 425 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 NPIPB8E9PQR5 432 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 UBXN8O00124 270 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ARVCFO00192 962 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ARNTLO00327 626 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 NME4O00746 187 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PIP5K1BO14986 540 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 LSM1O15116 133 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 HNRNPRO43390 633 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 PFDN1O60925 122 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CLASP2O75122 1294 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 ATP6V1G1O75348 118 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ECI2O75521 394 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SOAT2O75908 522 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 RHOBTB1O94844 696 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ESRRBO95718 433 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 TSPAN15O95858 294 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CXCL10P02778 98 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ESR1P03372 595 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ALDH2P05091 517 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 GALTP07902 379 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CCDC159P0C7I6 412 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 FAM58BPP0C7Q3 252 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 UROSP10746 265 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 UMPSP11172 480 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 FCGR1AP12314 374 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PKMP14618 531 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 ZNF23P17027 643 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 HMGA1P17096 107 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 ATF6P18850 670 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CAPN3P20807 821 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 LPOP22079 712 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 S100A1P23297 94 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SLC6A2P23975 617 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ATP5C1P36542 298 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 GDNFP39905 211 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PTGER3P43115 390 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CSNK1DP48730 415 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SLC11A1P49279 550 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SLC11A2P49281 568 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 TUFMP49411 452 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 TTPAP49638 278 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SLC7A2P52569 658 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 HNRNPFP52597 415 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 NR1H2P55055 460 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 RAD51Q06609 339 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ITKQ08881 620 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 MYBPC3Q14896 1274 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 NHSL2Q5HYW2 709 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CTSL3PQ5NE16 218 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 FAM171A1Q5VUB5 890 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CXorf57Q6NSI4 855 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 HMBOX1Q6NT76 420 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 UGT3A1Q6NUS8 523 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 TTC23LQ6PF05 361 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 C16orf87Q6PH81 154 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 RSPO2Q6UXX9 243 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 LRRC8DQ7L1W4 858 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SPRED1Q7Z699 444 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 LDB1Q86U70 411 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 CDH24Q86UP0 819 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SPATA24Q86W54 205 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SLC15A3Q8IY34 581 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 GPR65Q8IYL9 337 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 LGI2Q8N0V4 545 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 FBXO39Q8N4B4 442 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 HIPK4Q8NE63 616 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 MDGA1Q8NFP4 955 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 OR56A4Q8NGH8 313 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 OR52E4Q8NGH9 312 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 OR52K2Q8NGK3 314 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CD200R1Q8TD46 325 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 BLOC1S5Q8TDH9 187 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 UBTD2Q8WUN7 234 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ATP6V1E2Q96A05 226 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 TMEM125Q96AQ2 219 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ISG20Q96AZ6 181 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 PPP1R36Q96LQ0 422 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms