RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PCDHGA3Q9Y5H0 932 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 UBA6A0AVT1 1052 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-219ENST00000518824 CTAGE9A4FU28 777 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 KRT87PA6NCN2 255 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 SDR42E2A6NKP2 422 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 BTN3A1O00481 513 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 DNALI1O14645 258 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-219ENST00000518824 PRMT5O14744 637 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-219ENST00000518824 LIN7AO14910 233 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-219ENST00000518824 TIAF1O95411 115 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 FTH1P02794 183 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 LIPCP11150 499 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 MLNP12872 115 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 FOLR1P15328 257 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 EIF3BP55884 814 aaKnown RBP12.94□□□□□ -0.34
VEGFA-219ENST00000518824 FOXM1Q08050 763 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 RPA4Q13156 261 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 KRT33BQ14525 404 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 PRSS42Q7Z5A4 293 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 IGDCC3Q8IVU1 814 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 DENND6AQ8IWF6 608 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 PPIL6Q8IXY8 311 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 OTUD6BQ8N6M0 293 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 ACVR1CQ8NER5 493 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 LPGAT1Q92604 370 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 SLCO2A1Q92959 643 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 BIRC8Q96P09 236 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 VPS37BQ9H9H4 285 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 PLAC1Q9HBJ0 212 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 SEMA5BQ9P283 1151 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 TSR3Q9UJK0 312 aaKnown RBP12.94□□□□□ -0.34
VEGFA-219ENST00000518824 ANAPC5Q9UJX4 755 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 ICKQ9UPZ9 632 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 RUVBL2Q9Y230 463 aaKnown RBP12.94□□□□□ -0.34
VEGFA-219ENST00000518824 CRYL1Q9Y2S2 319 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 COLEC10Q9Y6Z7 277 aa12.94□□□□□ -0.34
VEGFA-219ENST00000518824 FAM237BA0A1B0GVD1 139 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 AP3B1O00203 1094 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 IFRD1O00458 451 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 TP73O15350 636 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 TTI1O43156 1089 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 NIPSNAP2O75323 286 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 GPC4O75487 556 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 NDUFS3O75489 264 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 SNRNP200O75643 2136 aaKnown RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 PVRP15151 417 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 NELFEP18615 380 aaKnown RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 AOAHP28039 575 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 FMO4P31512 558 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 CD151P48509 253 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 TTPAP49638 278 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 SARNPP82979 210 aaKnown RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 DHX9Q08211 1270 aaKnown RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 HSPA14Q0VDF9 509 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 ABRQ12979 859 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 CTBP1Q13363 440 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 COL9A2Q14055 689 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 DHX34Q14147 1143 aaKnown RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 TYSND1Q2T9J0 566 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 HP1BP3Q5SSJ5 553 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 DCAF12Q5T6F0 453 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 IZUMO3Q5VZ72 239 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 TMEM135Q86UB9 458 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 ADGRF3Q8IZF5 1079 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 ZFPM2Q8WW38 1151 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 LCN9Q8WX39 176 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 NKD1Q969G9 470 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 ZDHHC12Q96GR4 267 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 OR6C1Q96RD1 312 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 WDR83Q9BRX9 315 aaKnown RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 DDA1Q9BW61 102 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 CARD6Q9BX69 1037 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 KLHL25Q9H0H3 589 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 XAB2Q9HCS7 855 aaKnown RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 FBXO8Q9NRD0 319 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 KCND1Q9NSA2 647 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.93□□□□□ -0.34
VEGFA-219ENST00000518824 ASF1AQ9Y294 204 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 HEBP2Q9Y5Z4 205 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 RPS6KL1Q9Y6S9 549 aa12.93□□□□□ -0.34
VEGFA-219ENST00000518824 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-219ENST00000518824 QSOX1O00391 747 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 S1PR4O95977 384 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 GSTM1P09488 218 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 EBLN1P0CF75 366 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 RPS3P23396 243 aaKnown RBP eCLIP12.92□□□□□ -0.34
VEGFA-219ENST00000518824 NDUFS1P28331 727 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 PEBP1P30086 187 aaKnown RBP12.92□□□□□ -0.34
VEGFA-219ENST00000518824 GSTM4Q03013 218 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 SYTL3Q4VX76 610 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 AARS2Q5JTZ9 985 aaKnown RBP12.92□□□□□ -0.34
VEGFA-219ENST00000518824 DNTTIP2Q5QJE6 756 aaKnown RBP12.92□□□□□ -0.34
VEGFA-219ENST00000518824 TMEM164Q5U3C3 297 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 KIAA1614Q5VZ46 1190 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 PTRHD1Q6GMV3 140 aaKnown RBP12.92□□□□□ -0.34
VEGFA-219ENST00000518824 NEPROQ6NW34 567 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 PCSK4Q6UW60 755 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 SYT10Q6XYQ8 523 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 TRIM73Q86UV7 250 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 OOSP2Q86WS3 158 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms