RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 NIPSNAP2O75323 286 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 SLCO2B1O94956 709 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 MPSTP25325 297 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 PLTPP55058 493 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 CSE1LP55060 971 aaKnown RBP21.43■■□□□ 1.02
VEGFA-217ENST00000518538 MPP1Q00013 466 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 KLHL35Q6PF15 583 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 OTOAQ7RTW8 1153 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 ZBED8Q8IZ13 594 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 LSMEM2Q8N112 164 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 MDM1Q8TC05 714 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 JPH3Q8WXH2 748 aaPredicted RBP21.43■■□□□ 1.02
VEGFA-217ENST00000518538 SEC14L1Q92503 715 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 RSC1A1Q92681 617 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 CMKLR1Q99788 373 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 PHACTR1Q9C0D0 580 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 ASF1AQ9Y294 204 aa21.43■■□□□ 1.02
VEGFA-217ENST00000518538 DXOO77932 396 aaKnown RBP21.42■■□□□ 1.02
VEGFA-217ENST00000518538 C9P02748 559 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 F7P08709 466 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-217ENST00000518538 TRADDQ15628 312 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 PLEKHS1Q5SXH7 462 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 IGF2-ASQ6U949 168 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 ZDHHC24Q6UX98 284 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 KIAA0408Q6ZU52 694 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 VRK3Q8IV63 474 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 FBXO39Q8N4B4 442 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 CEP112Q8N8E3 955 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 KDF1Q8NAX2 398 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-217ENST00000518538 NOA1Q8NC60 698 aaKnown RBP21.42■■□□□ 1.02
VEGFA-217ENST00000518538 RCBTB1Q8NDN9 531 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 PHC3Q8NDX5 983 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 FBXO25Q8TCJ0 367 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 RAB33BQ9H082 229 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 CCDC68Q9H2F9 335 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 PPANQ9NQ55 473 aaKnown RBP21.42■■□□□ 1.02
VEGFA-217ENST00000518538 AKAP7Q9P0M2 348 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-217ENST00000518538 EPHA6Q9UF33 1036 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 LOXL2Q9Y4K0 774 aa21.42■■□□□ 1.02
VEGFA-217ENST00000518538 E5RI56 91 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 PLD2O14939 933 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 BRINP1O60477 761 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 CHRM3P20309 590 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 LEPRP48357 1165 aaKnown RBP21.41■■□□□ 1.02
VEGFA-217ENST00000518538 GFERP55789 205 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 C16orf72Q14CZ0 275 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 TRMT10BQ6PF06 316 aaKnown RBP21.41■■□□□ 1.02
VEGFA-217ENST00000518538 CNSTQ6PJW8 725 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 GALNT7Q86SF2 657 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 TBC1D21Q8IYX1 336 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 GSDMBQ8TAX9 411 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 PYROXD1Q8WU10 500 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 ZCCHC14Q8WYQ9 949 aaKnown RBP21.41■■□□□ 1.02
VEGFA-217ENST00000518538 PRR11Q96HE9 360 aaPredicted RBP21.41■■□□□ 1.02
VEGFA-217ENST00000518538 HGH1Q9BTY7 390 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 SAYSD1Q9NPB0 183 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 LATS2Q9NRM7 1088 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 COMMD10Q9Y6G5 202 aa21.41■■□□□ 1.02
VEGFA-217ENST00000518538 ESYT3A0FGR9 886 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 PMS2P1A4D2B8 440 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 CAPN5O15484 640 aaPredicted RBP21.4■■□□□ 1.02
VEGFA-217ENST00000518538 HAUS5O94927 633 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 MLLT3P42568 568 aaPredicted RBP21.4■■□□□ 1.02
VEGFA-217ENST00000518538 CARSP49589 748 aaKnown RBP21.4■■□□□ 1.02
VEGFA-217ENST00000518538 GUCY2DQ02846 1103 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 GBX1Q14549 363 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 GLE1Q53GS7 698 aaKnown RBP21.4■■□□□ 1.02
VEGFA-217ENST00000518538 SNAP47Q5SQN1 464 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 TEDDM1Q5T9Z0 273 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 ZNF549Q6P9A3 640 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 ARHGAP22Q7Z5H3 698 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 OOSP2Q86WS3 158 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 OR52E1Q8NGJ3 308 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 OR5AR1Q8NGP9 310 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 OR5K2Q8NHB8 316 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 KCNJ9Q92806 393 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 C9orf72Q96LT7 481 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 TGM7Q96PF1 710 aa21.4■■□□□ 1.02
VEGFA-217ENST00000518538 TRIT1Q9H3H1 467 aaKnown RBP21.4■■□□□ 1.02
VEGFA-217ENST00000518538 TFB2MQ9H5Q4 396 aaKnown RBP21.4■■□□□ 1.02
VEGFA-217ENST00000518538 AKAP13Q12802 2813 aa21.39■■□□□ 1.02
VEGFA-217ENST00000518538 CEP295Q9C0D2 2601 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 OR5K3A6NET4 321 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 ANKRD34CP0C6C1 535 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 JMJD7P0C870 316 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 RBMS1P29558 406 aaKnown RBP21.39■■□□□ 1.01
VEGFA-217ENST00000518538 ATP5DP30049 168 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 MGAT5Q09328 741 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 FOXR1Q6PIV2 292 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 ZBTB2Q8N680 514 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 AGBL5Q8NDL9 886 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 LCN9Q8WX39 176 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 FAM136AQ96C01 138 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 ZDHHC12Q96GR4 267 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 SLC46A1Q96NT5 459 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 SRMSQ9H3Y6 488 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 MOCS1Q9NZB8 636 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 KLHL42Q9P2K6 505 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 KLHL3Q9UH77 587 aa21.39■■□□□ 1.01
VEGFA-217ENST00000518538 POLG2Q9UHN1 485 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms